OMPC2_SHIFM
ID OMPC2_SHIFM Reviewed; 366 AA.
AC A0A4P7TME1;
DT 26-FEB-2020, integrated into UniProtKB/Swiss-Prot.
DT 31-JUL-2019, sequence version 1.
DT 25-MAY-2022, entry version 11.
DE RecName: Full=Outer membrane porin C 2 {ECO:0000305};
DE AltName: Full=Outer membrane protein C 2;
DE AltName: Full=Porin OmpC2;
DE Flags: Precursor;
GN Name=ompC2 {ECO:0000305}; ORFNames=EKN05_007325;
OS Shigella flexneri serotype 5a (strain M90T).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Shigella.
OX NCBI_TaxID=1086030;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M90T / Serotype 5a;
RA Cervantes-Rivera R., Puhar A.;
RT "Complete genome sequence and annotation of the laboratory reference strain
RT Shigella flexneri 5a M90T and genome-wide transcription start site
RT determination.";
RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP FUNCTION IN VIRULENCE, SUBCELLULAR LOCATION, INDUCTION, AND DISRUPTION
RP PHENOTYPE.
RC STRAIN=M90T / Serotype 5a;
RX PubMed=8359885; DOI=10.1128/iai.61.9.3625-3635.1993;
RA Bernardini M.L., Sanna M.G., Fontaine A., Sansonetti P.J.;
RT "OmpC is involved in invasion of epithelial cells by Shigella flexneri.";
RL Infect. Immun. 61:3625-3635(1993).
CC -!- FUNCTION: Forms pores that allow passive diffusion of small molecules
CC across the outer membrane (Probable). Plays a role in virulence
CC (PubMed:8359885). {ECO:0000269|PubMed:8359885, ECO:0000305}.
CC -!- SUBUNIT: Homotrimer. Forms mixed heterotrimers with OmpF and with PhoE;
CC other mixed heterotrimers are also probable.
CC {ECO:0000250|UniProtKB:P06996}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000269|PubMed:8359885};
CC Multi-pass membrane protein {ECO:0000250|UniProtKB:P06996}.
CC -!- INDUCTION: Unlike E.coli, constitutively expressed at low and high
CC osmolarity (0.3M NaCl) (at protein level). Expression is under the
CC control of OmpR-EnvZ two-component system; still expressed at very low
CC levels in high osmolarity in the absence of ompR-envZ (at protein
CC elevel). {ECO:0000269|PubMed:8359885}.
CC -!- DISRUPTION PHENOTYPE: Lowered rate of infection of HeLa cells. Bacteria
CC are seriously impaired in their ability to spread from host cell to
CC host cell. {ECO:0000269|PubMed:8359885}.
CC -!- MISCELLANEOUS: This strain has 2 ompC genes; it is not clear which one
CC has been detected in cell outer membranes nor deleted in
CC PubMed:8359885. {ECO:0000305|PubMed:8359885}.
CC -!- SIMILARITY: Belongs to the Gram-negative porin family. {ECO:0000305}.
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DR EMBL; CP037923; QCC31501.1; -; Genomic_DNA.
DR RefSeq; WP_000768403.1; NZ_CM001474.1.
DR AlphaFoldDB; A0A4P7TME1; -.
DR SMR; A0A4P7TME1; -.
DR EnsemblBacteria; QCC31501; QCC31501; EKN05_007325.
DR Proteomes; UP000296678; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0046930; C:pore complex; IEA:UniProtKB-KW.
DR GO; GO:0015288; F:porin activity; IEA:UniProtKB-KW.
DR GO; GO:0034220; P:ion transmembrane transport; IEA:InterPro.
DR CDD; cd00342; gram_neg_porins; 1.
DR Gene3D; 2.40.160.10; -; 1.
DR InterPro; IPR033900; Gram_neg_porin_domain.
DR InterPro; IPR023614; Porin_dom_sf.
DR InterPro; IPR001897; Porin_gammaproteobac.
DR InterPro; IPR001702; Porin_Gram-ve.
DR InterPro; IPR013793; Porin_Gram-ve_CS.
DR Pfam; PF00267; Porin_1; 1.
DR PRINTS; PR00183; ECOLIPORIN.
DR PRINTS; PR00182; ECOLNEIPORIN.
DR PROSITE; PS00576; GRAM_NEG_PORIN; 1.
PE 1: Evidence at protein level;
KW Cell outer membrane; Ion transport; Membrane; Porin; Signal; Transmembrane;
KW Transmembrane beta strand; Transport; Virulence.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..366
FT /note="Outer membrane porin C 2"
FT /evidence="ECO:0000255"
FT /id="PRO_5020959323"
SQ SEQUENCE 366 AA; 41010 MW; 5FE2D0E30E34C0A9 CRC64;
MKLKIVAVVV TGLLAANVAH AAEVYNKDGN KLDLYGKVTA LRYFTDDKRD DGDKTYARLG
FKGGTQINDQ MIGFGHWEYD FKGYNDEANG SRGNKTRLAY AGLKISEFGS LDYGRNYGVG
YDIGSWTDML PEFGGDTWSQ KDVFMTYRTT GLATYRNYDF FGLIEGLNFA AQYQGKNERT
DNSHLYGADY TRANGDGFGI SSTYVYDGFG IGAVYTKSDR TNAQERAAAN PLNASGKNAE
LWATGIKYDA NNIYFAANYD ETLNMTTYGD GYISNKAQSF EVVAQYQFDF GLRPSLAYLK
SKGRDLGRYA DQDMIEYIDV GATYFFNKNM STYVDYKINL IDESDFTRAV DIRTDNIVAT
GITYQF