OMPF_SHIFM
ID OMPF_SHIFM Reviewed; 362 AA.
AC A0A4P7TN82;
DT 26-FEB-2020, integrated into UniProtKB/Swiss-Prot.
DT 31-JUL-2019, sequence version 1.
DT 25-MAY-2022, entry version 12.
DE RecName: Full=Outer membrane porin F {ECO:0000303|PubMed:8359885};
DE AltName: Full=Outer membrane protein F;
DE AltName: Full=Porin OmpF;
DE Flags: Precursor;
GN Name=ompF; ORFNames=EKN05_011710;
OS Shigella flexneri serotype 5a (strain M90T).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Shigella.
OX NCBI_TaxID=1086030;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M90T / Serotype 5a;
RA Cervantes-Rivera R., Puhar A.;
RT "Complete genome sequence and annotation of the laboratory reference strain
RT Shigella flexneri 5a M90T and genome-wide transcription start site
RT determination.";
RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP SUBCELLULAR LOCATION, INDUCTION, AND DISRUPTION PHENOTYPE.
RC STRAIN=M90T / Serotype 5a;
RX PubMed=8359885; DOI=10.1128/iai.61.9.3625-3635.1993;
RA Bernardini M.L., Sanna M.G., Fontaine A., Sansonetti P.J.;
RT "OmpC is involved in invasion of epithelial cells by Shigella flexneri.";
RL Infect. Immun. 61:3625-3635(1993).
CC -!- FUNCTION: Forms pores that allow passive diffusion of small molecules
CC across the outer membrane. {ECO:0000305}.
CC -!- SUBUNIT: Homotrimer. Forms mixed heterotrimers with OmpC and with PhoE;
CC other mixed heterotrimers are also probable.
CC {ECO:0000250|UniProtKB:P02931}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000269|PubMed:8359885};
CC Multi-pass membrane protein {ECO:0000250|UniProtKB:P02931}.
CC -!- INDUCTION: Expressed at low osmolarity, not expressed at high
CC osmolarity (at protein level). Expression is under the control of OmpR-
CC EnvZ two-component system; not expressed in the absence of ompR-envZ
CC (at protein elevel). {ECO:0000269|PubMed:8359885}.
CC -!- DISRUPTION PHENOTYPE: No visible effect on infection of HeLa cells.
CC {ECO:0000269|PubMed:8359885}.
CC -!- SIMILARITY: Belongs to the Gram-negative porin family. {ECO:0000305}.
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DR EMBL; CP037923; QCC32183.1; -; Genomic_DNA.
DR RefSeq; WP_000977920.1; NZ_CM001474.1.
DR AlphaFoldDB; A0A4P7TN82; -.
DR SMR; A0A4P7TN82; -.
DR EnsemblBacteria; QCC32183; QCC32183; EKN05_011710.
DR GeneID; 66670795; -.
DR Proteomes; UP000296678; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0046930; C:pore complex; IEA:UniProtKB-KW.
DR GO; GO:0015288; F:porin activity; IEA:UniProtKB-KW.
DR GO; GO:0034220; P:ion transmembrane transport; IEA:InterPro.
DR CDD; cd00342; gram_neg_porins; 1.
DR Gene3D; 2.40.160.10; -; 1.
DR InterPro; IPR033900; Gram_neg_porin_domain.
DR InterPro; IPR023614; Porin_dom_sf.
DR InterPro; IPR001897; Porin_gammaproteobac.
DR InterPro; IPR001702; Porin_Gram-ve.
DR InterPro; IPR013793; Porin_Gram-ve_CS.
DR Pfam; PF00267; Porin_1; 1.
DR PRINTS; PR00183; ECOLIPORIN.
DR PRINTS; PR00182; ECOLNEIPORIN.
DR PROSITE; PS00576; GRAM_NEG_PORIN; 1.
PE 1: Evidence at protein level;
KW Cell outer membrane; Ion transport; Membrane; Porin; Signal; Transmembrane;
KW Transmembrane beta strand; Transport.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..362
FT /note="Outer membrane porin F"
FT /evidence="ECO:0000255"
FT /id="PRO_5020675545"
SQ SEQUENCE 362 AA; 39333 MW; 3F0974D96DB65464 CRC64;
MMKRNILAVI VPALLVAGTA NAAEIYNKDG NKVDLYGKAV GLHYFSKGNG ENSYGGNGDM
TYARLGFKGE TQINSDLTGY GQWEYNFQGN NSEGADAQTG NKTRLAFAGL KYADVGSFDY
GRNYGVVYDA LGYTDMLPEF GGDTAYSDDF FVGRVGGVAT YRNSNFFGLV DGLNFAVQYL
GKNERDTARR SNGDGVGGSI SYEYEGFGIV GAYGAADRTN LQEAQPLGNG KKAEQWATGL
KYDANNIYLA ANYGETRNAT PITNKFTNTS GFANKTQDVL LVAQYQFDFG LRPSIAYTKS
KAKDVEGIGD VDLVNYFEVG ATYYFNKNMS TYVDYIINQI DSDNKLGVGS DDTVAVGIVY
QF