OPF13_ARATH
ID OPF13_ARATH Reviewed; 260 AA.
AC Q9FMC8;
DT 09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Transcription repressor OFP13;
DE AltName: Full=Ovate family protein 13;
DE Short=AtOFP13;
GN Name=OFP13; OrderedLocusNames=At5g04820; ORFNames=MUK11.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP FUNCTION, TISSUE SPECIFICITY, AND GENE FAMILY.
RX PubMed=21886836; DOI=10.1371/journal.pone.0023896;
RA Wang S., Chang Y., Guo J., Zeng Q., Ellis B.E., Chen J.G.;
RT "Arabidopsis ovate family proteins, a novel transcriptional repressor
RT family, control multiple aspects of plant growth and development.";
RL PLoS ONE 6:E23896-E23896(2011).
CC -!- FUNCTION: Transcriptional repressor that regulates multiple aspects of
CC plant growth and development through the regulation of BEL1-LIKE (BLH)
CC and KNOX TALE (KNAT) homeodomain transcription factors.
CC {ECO:0000269|PubMed:21886836}.
CC -!- INTERACTION:
CC Q9FMC8; O82503: CRF1; NbExp=3; IntAct=EBI-15204858, EBI-5567050;
CC Q9FMC8; Q9ZR37: DSPTP1; NbExp=3; IntAct=EBI-15204858, EBI-25512239;
CC Q9FMC8; Q8GXL7: GATA24; NbExp=4; IntAct=EBI-15204858, EBI-4426127;
CC Q9FMC8; Q8H1G0: GATA28; NbExp=4; IntAct=EBI-15204858, EBI-4435064;
CC Q9FMC8; Q8GYY1: HSFA3; NbExp=3; IntAct=EBI-15204858, EBI-15198195;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, rosette and cauline leaves,
CC shoots, stems, flower buds and siliques. {ECO:0000269|PubMed:21886836}.
CC -!- MISCELLANEOUS: Plants over-expressing OFP13 show small rosette size,
CC late flowering, reduced fertilization and blunt-end siliques.
CC {ECO:0000305|PubMed:21886836}.
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DR EMBL; AB008271; BAB08986.1; -; Genomic_DNA.
DR EMBL; CP002688; AED90790.1; -; Genomic_DNA.
DR EMBL; AY065447; AAL38888.1; -; mRNA.
DR EMBL; AY117279; AAM51354.1; -; mRNA.
DR EMBL; AY084744; AAM61315.1; -; mRNA.
DR RefSeq; NP_196102.1; NM_120564.2.
DR AlphaFoldDB; Q9FMC8; -.
DR BioGRID; 15640; 19.
DR IntAct; Q9FMC8; 19.
DR STRING; 3702.AT5G04820.1; -.
DR PaxDb; Q9FMC8; -.
DR PRIDE; Q9FMC8; -.
DR EnsemblPlants; AT5G04820.1; AT5G04820.1; AT5G04820.
DR GeneID; 830361; -.
DR Gramene; AT5G04820.1; AT5G04820.1; AT5G04820.
DR KEGG; ath:AT5G04820; -.
DR Araport; AT5G04820; -.
DR TAIR; locus:2175453; AT5G04820.
DR eggNOG; ENOG502RFQ4; Eukaryota.
DR HOGENOM; CLU_066339_1_1_1; -.
DR InParanoid; Q9FMC8; -.
DR OMA; WYLGANG; -.
DR OrthoDB; 1441585at2759; -.
DR PhylomeDB; Q9FMC8; -.
DR PRO; PR:Q9FMC8; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FMC8; baseline and differential.
DR Genevisible; Q9FMC8; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IDA:TAIR.
DR InterPro; IPR038933; Ovate.
DR InterPro; IPR006458; Ovate_C.
DR PANTHER; PTHR33057; PTHR33057; 1.
DR Pfam; PF04844; Ovate; 1.
DR TIGRFAMs; TIGR01568; A_thal_3678; 1.
DR PROSITE; PS51754; OVATE; 1.
PE 1: Evidence at protein level;
KW Nucleus; Reference proteome; Repressor; Transcription;
KW Transcription regulation.
FT CHAIN 1..260
FT /note="Transcription repressor OFP13"
FT /id="PRO_0000429682"
FT DOMAIN 150..211
FT /note="OVATE"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01090"
SQ SEQUENCE 260 AA; 28383 MW; 4BD51FC28AF09EDE CRC64;
MGKKKMKLSS LFKGGAGGLL AVPLCYNAKT LSFRVGDDMI KTVNSVFFDH HHNNNNGGDL
LEAETPESWF TNSSETASHS TESDQDLDAE SLEMVVRGVV RSERLFFDPG VTSSILEEIE
EKSKSDLKSK ETVAVGEDRS TPIEEISVAV AMESEDPYGD FRRSMEEMVT SHGELAKDWE
SLESMLAWYL RMNGRKSHGV IVSAFVDLLS GLSDSGAGIT SASVSDSARY STAVSSLPSS
PVYSLSQGQT EIQEEERRSC