OPGD_PSEF5
ID OPGD_PSEF5 Reviewed; 539 AA.
AC Q4KHN0;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 02-AUG-2005, sequence version 1.
DT 25-MAY-2022, entry version 85.
DE RecName: Full=Glucans biosynthesis protein D {ECO:0000255|HAMAP-Rule:MF_01068};
DE Flags: Precursor;
GN Name=opgD {ECO:0000255|HAMAP-Rule:MF_01068}; OrderedLocusNames=PFL_1122;
OS Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=220664;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-477 / NRRL B-23932 / Pf-5;
RX PubMed=15980861; DOI=10.1038/nbt1110;
RA Paulsen I.T., Press C.M., Ravel J., Kobayashi D.Y., Myers G.S.A.,
RA Mavrodi D.V., DeBoy R.T., Seshadri R., Ren Q., Madupu R., Dodson R.J.,
RA Durkin A.S., Brinkac L.M., Daugherty S.C., Sullivan S.A., Rosovitz M.J.,
RA Gwinn M.L., Zhou L., Schneider D.J., Cartinhour S.W., Nelson W.C.,
RA Weidman J., Watkins K., Tran K., Khouri H., Pierson E.A., Pierson L.S. III,
RA Thomashow L.S., Loper J.E.;
RT "Complete genome sequence of the plant commensal Pseudomonas fluorescens
RT Pf-5.";
RL Nat. Biotechnol. 23:873-878(2005).
CC -!- FUNCTION: Probably involved in the control of the structural glucose
CC backbone of osmoregulated periplasmic glucans (OPGs).
CC {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PATHWAY: Glycan metabolism; osmoregulated periplasmic glucan (OPG)
CC biosynthesis. {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the OpgD/OpgG family. {ECO:0000255|HAMAP-
CC Rule:MF_01068}.
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DR EMBL; CP000076; AAY90409.1; -; Genomic_DNA.
DR RefSeq; WP_011059470.1; NC_004129.6.
DR AlphaFoldDB; Q4KHN0; -.
DR SMR; Q4KHN0; -.
DR STRING; 220664.PFL_1122; -.
DR EnsemblBacteria; AAY90409; AAY90409; PFL_1122.
DR KEGG; pfl:PFL_1122; -.
DR PATRIC; fig|220664.5.peg.1152; -.
DR eggNOG; COG3131; Bacteria.
DR HOGENOM; CLU_023403_2_0_6; -.
DR OMA; DVQFFHV; -.
DR OrthoDB; 1049230at2; -.
DR UniPathway; UPA00637; -.
DR Proteomes; UP000008540; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009250; P:glucan biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR HAMAP; MF_01068; MdoD_OpgD; 1.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR023724; Glucan_biosyn_MdoD.
DR InterPro; IPR014438; Glucan_biosyn_MdoG/MdoD.
DR InterPro; IPR007444; Glucan_biosyn_MdoG_C.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR006311; TAT_signal.
DR PANTHER; PTHR30504; PTHR30504; 1.
DR Pfam; PF04349; MdoG; 1.
DR PIRSF; PIRSF006281; MdoG; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
DR PROSITE; PS51318; TAT; 1.
PE 3: Inferred from homology;
KW Periplasm; Reference proteome; Signal.
FT SIGNAL 1..31
FT /note="Tat-type signal"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01068"
FT CHAIN 32..539
FT /note="Glucans biosynthesis protein D"
FT /id="PRO_1000064549"
SQ SEQUENCE 539 AA; 60513 MW; A492CE0B23F024D0 CRC64;
MHRRNLLKAS MALAAYTGLS ASGLLAARAW AGAADGQAQA FDFEQLKAQA KQLAASQYVD
TKQVLPPTLA KMTPQNFNAI QYDSKHSLWN ELNGQLDVQF FHVGMGFKQP VRMHSVDPKT
RQAREVHFRP PLFNYQNTSV DTAQLKGDLG FAGFKLFKAP ELDKHDVVSF LGASYFRAVD
ATGQYGLSAR GLAIDTYAKR REEFPDFTQF WFETPDKDST RFVVYALLDS PSATGAYRFD
IDCQAERVVM DVDAHINART AIEQLGIAPM TSMFSCGTHE RRMCDTIHPQ IHDSDRLAMW
RGNGEWICRP LNNPANLQFN AFADKDPKGF GLVQTDHEFA SYQDTVDWYS RRPSLWVEPT
TAWGEGSIDL LEIPTTGETL DNIVAFWTPK KPVAAGDSLN YGYKLYWSAL PPVGTPLARV
HATRSGMGGF VEGWAPGEHY PEVWARRFAV DFTGGGLDRL PAGTGIEPVV TASNGEVKDF
NVLVLDEIKG YRITFDWFPT NDSVEPVELR LFIRTNDRTL SETWLYQYFP PAPDKRKYP