OPGD_PSESM
ID OPGD_PSESM Reviewed; 539 AA.
AC Q87TX5;
DT 03-JUL-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 25-MAY-2022, entry version 99.
DE RecName: Full=Glucans biosynthesis protein D;
DE Flags: Precursor;
GN Name=opgD; OrderedLocusNames=PSPTO_5542;
OS Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=223283;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-871 / DC3000;
RX PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R.,
RA Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C.,
RA Davidsen T.M., Zafar N., Zhou L., Liu J., Yuan Q., Khouri H.M.,
RA Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R.,
RA Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R.,
RA Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G.,
RA Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M.,
RA Collmer A.;
RT "The complete genome sequence of the Arabidopsis and tomato pathogen
RT Pseudomonas syringae pv. tomato DC3000.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC -!- FUNCTION: Probably involved in the control of the structural glucose
CC backbone of osmoregulated periplasmic glucans (OPGs). {ECO:0000250}.
CC -!- PATHWAY: Glycan metabolism; osmoregulated periplasmic glucan (OPG)
CC biosynthesis.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000250}.
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the OpgD/OpgG family. {ECO:0000305}.
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DR EMBL; AE016853; AAO58961.1; -; Genomic_DNA.
DR RefSeq; NP_795266.1; NC_004578.1.
DR RefSeq; WP_005768286.1; NC_004578.1.
DR AlphaFoldDB; Q87TX5; -.
DR SMR; Q87TX5; -.
DR STRING; 223283.PSPTO_5542; -.
DR EnsemblBacteria; AAO58961; AAO58961; PSPTO_5542.
DR GeneID; 1187234; -.
DR KEGG; pst:PSPTO_5542; -.
DR PATRIC; fig|223283.9.peg.5677; -.
DR eggNOG; COG3131; Bacteria.
DR HOGENOM; CLU_023403_2_0_6; -.
DR OMA; DVQFFHV; -.
DR OrthoDB; 1049230at2; -.
DR PhylomeDB; Q87TX5; -.
DR UniPathway; UPA00637; -.
DR Proteomes; UP000002515; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009250; P:glucan biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR HAMAP; MF_01068; MdoD_OpgD; 1.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR023724; Glucan_biosyn_MdoD.
DR InterPro; IPR014438; Glucan_biosyn_MdoG/MdoD.
DR InterPro; IPR007444; Glucan_biosyn_MdoG_C.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR006311; TAT_signal.
DR PANTHER; PTHR30504; PTHR30504; 1.
DR Pfam; PF04349; MdoG; 1.
DR PIRSF; PIRSF006281; MdoG; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
DR PROSITE; PS51318; TAT; 1.
PE 3: Inferred from homology;
KW Periplasm; Reference proteome; Signal.
FT SIGNAL 1..29
FT /note="Tat-type signal"
FT /evidence="ECO:0000255"
FT CHAIN 30..539
FT /note="Glucans biosynthesis protein D"
FT /id="PRO_0000020209"
SQ SEQUENCE 539 AA; 60575 MW; C9CEF7B8C1D649E2 CRC64;
MNRRNLLKAS MALAAYGSVS ASGLYAARAL AAAADGEIEH FDFAELQAHA KKLAGKGYVS
NKQVLPPVLA NMTPLQFNAI RYDPNHSLWK DVNGQLDVHF FHVGMGFKTP VRMYSVDPQN
KQAREVHFRH DLFNYESSGI DKNLVKGDLG FAGFKLFKAP EIAINDVVSF LGASYFRAVD
SNKQYGLSAR GLAIDSYAKR QEEFPDFTKF WFETPDKNAT RFVVYALLDS PSATGAYRFD
IDCQAGQVVM EIDAHINART DIQQLGISPM TSMFSCGTHE RRMCDTIHPQ IHDSDRLSMW
RGNGEWICRP LNNPAKPQFS AFADKDPKGF GLVQSDHEFS SYQDTVVWYS RRPSLWVEPI
TAWGEGEVSL LELPTTGETM DNIVVFWTPK TPVKAGDSLN YGYKLFWSPL PPVSTPLAQV
HATRSGMGGF LEGWAPGEHY PKTWARRFAV DFNGGGLDRL PEGTGIEPIV TVSHGKVQDF
NILVLPDIKG YRITFDWVPD SDSVDPVEMR MFIRTGDRTL SETWMYQYFP PALDKRKYP