OPGD_PSEU2
ID OPGD_PSEU2 Reviewed; 539 AA.
AC Q4ZL60;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 07-JUN-2005, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=Glucans biosynthesis protein D {ECO:0000255|HAMAP-Rule:MF_01068};
DE Flags: Precursor;
GN Name=opgD {ECO:0000255|HAMAP-Rule:MF_01068}; OrderedLocusNames=Psyr_5085;
OS Pseudomonas syringae pv. syringae (strain B728a).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.
OX NCBI_TaxID=205918;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B728a;
RX PubMed=16043691; DOI=10.1073/pnas.0504930102;
RA Feil H., Feil W.S., Chain P., Larimer F., Dibartolo G., Copeland A.,
RA Lykidis A., Trong S., Nolan M., Goltsman E., Thiel J., Malfatti S.,
RA Loper J.E., Lapidus A., Detter J.C., Land M., Richardson P.M.,
RA Kyrpides N.C., Ivanova N., Lindow S.E.;
RT "Comparison of the complete genome sequences of Pseudomonas syringae pv.
RT syringae B728a and pv. tomato DC3000.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:11064-11069(2005).
CC -!- FUNCTION: Probably involved in the control of the structural glucose
CC backbone of osmoregulated periplasmic glucans (OPGs).
CC {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PATHWAY: Glycan metabolism; osmoregulated periplasmic glucan (OPG)
CC biosynthesis. {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the OpgD/OpgG family. {ECO:0000255|HAMAP-
CC Rule:MF_01068}.
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DR EMBL; CP000075; AAY40112.1; -; Genomic_DNA.
DR RefSeq; WP_003401346.1; NC_007005.1.
DR RefSeq; YP_238150.1; NC_007005.1.
DR AlphaFoldDB; Q4ZL60; -.
DR SMR; Q4ZL60; -.
DR STRING; 205918.Psyr_5085; -.
DR EnsemblBacteria; AAY40112; AAY40112; Psyr_5085.
DR KEGG; psb:Psyr_5085; -.
DR PATRIC; fig|205918.7.peg.5245; -.
DR eggNOG; COG3131; Bacteria.
DR HOGENOM; CLU_023403_2_0_6; -.
DR OMA; DVQFFHV; -.
DR UniPathway; UPA00637; -.
DR Proteomes; UP000000426; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009250; P:glucan biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR HAMAP; MF_01068; MdoD_OpgD; 1.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR023724; Glucan_biosyn_MdoD.
DR InterPro; IPR014438; Glucan_biosyn_MdoG/MdoD.
DR InterPro; IPR007444; Glucan_biosyn_MdoG_C.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR006311; TAT_signal.
DR PANTHER; PTHR30504; PTHR30504; 1.
DR Pfam; PF04349; MdoG; 1.
DR PIRSF; PIRSF006281; MdoG; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
DR PROSITE; PS51318; TAT; 1.
PE 3: Inferred from homology;
KW Periplasm; Signal.
FT SIGNAL 1..29
FT /note="Tat-type signal"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01068"
FT CHAIN 30..539
FT /note="Glucans biosynthesis protein D"
FT /id="PRO_1000064550"
SQ SEQUENCE 539 AA; 60572 MW; A4585794F3552B2B CRC64;
MNRRNLLKAS MALAAYGSVS ASGLFAARAL AAAADGEIEH FDFAELQAHA KKLASKGYVS
NKQVLPPVLA NMTPQQFNAI RYDPNHSLWK DVHGQLDVHF FHVGMGFKTP VRMYSVDPQS
KQAREVHFRH DLFNYENSGI DKNLVKGDLG FAGFKLFKAP EIAINDVVSF LGASYFRAVD
SNKQYGLSAR GLAIDSYAKR QEEFPDFTKF WFETPDKNAT RFVVYALLDS PSATGAYRFD
IDCQAGQVVM EIDAHVNART DIQQLGISPM TSMFSCGTHE RRMCDTIHPQ IHDSDRLSMW
RGNGEWICRP LNNPAKPQFS AFSDTDPKGF GLVQSDHEFS SYQDTVVWYS RRPSLWVEPI
TAWGEGEVSL LELPTTGETM DNIVVFWTPK TPVKAGDSMN YGYKLFWSPL PPVSTPLAQV
HATRSGMGGF LEGWAPGEHY PTTWARRFAV DFNGGGLDRL PEGTGIEPIV TVTHGKVQDF
NILVLPDIKG YRVTFDWVPD SDSVEPVEMR MFIRTGDRTL SETWLYQYFP PAPDKRKYP