OPGD_STRM5
ID OPGD_STRM5 Reviewed; 534 AA.
AC B4SRN1;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 72.
DE RecName: Full=Glucans biosynthesis protein D {ECO:0000255|HAMAP-Rule:MF_01068};
DE Flags: Precursor;
GN Name=opgD {ECO:0000255|HAMAP-Rule:MF_01068}; OrderedLocusNames=Smal_0046;
OS Stenotrophomonas maltophilia (strain R551-3).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.
OX NCBI_TaxID=391008;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=R551-3;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Taghavi S.,
RA Monchy S., Newman L., Vangronsveld J., van der Lelie D., Richardson P.;
RT "Complete sequence of Stenotrophomonas maltophilia R551-3.";
RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probably involved in the control of the structural glucose
CC backbone of osmoregulated periplasmic glucans (OPGs).
CC {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PATHWAY: Glycan metabolism; osmoregulated periplasmic glucan (OPG)
CC biosynthesis. {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the OpgD/OpgG family. {ECO:0000255|HAMAP-
CC Rule:MF_01068}.
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DR EMBL; CP001111; ACF49751.1; -; Genomic_DNA.
DR RefSeq; WP_012509627.1; NC_011071.1.
DR AlphaFoldDB; B4SRN1; -.
DR SMR; B4SRN1; -.
DR STRING; 391008.Smal_0046; -.
DR EnsemblBacteria; ACF49751; ACF49751; Smal_0046.
DR KEGG; smt:Smal_0046; -.
DR eggNOG; COG3131; Bacteria.
DR HOGENOM; CLU_023403_2_0_6; -.
DR OMA; DVQFFHV; -.
DR OrthoDB; 1049230at2; -.
DR BioCyc; SMAL391008:SMAL_RS00230-MON; -.
DR UniPathway; UPA00637; -.
DR Proteomes; UP000001867; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009250; P:glucan biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR HAMAP; MF_01068; MdoD_OpgD; 1.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR023724; Glucan_biosyn_MdoD.
DR InterPro; IPR014438; Glucan_biosyn_MdoG/MdoD.
DR InterPro; IPR007444; Glucan_biosyn_MdoG_C.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR PANTHER; PTHR30504; PTHR30504; 1.
DR Pfam; PF04349; MdoG; 1.
DR PIRSF; PIRSF006281; MdoG; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
PE 3: Inferred from homology;
KW Periplasm; Signal.
FT SIGNAL 1..26
FT /note="Tat-type signal"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01068"
FT CHAIN 27..534
FT /note="Glucans biosynthesis protein D"
FT /id="PRO_5000389642"
SQ SEQUENCE 534 AA; 60027 MW; 67598A65EDCD84B5 CRC64;
MQRRDFIRNA SLALAAFGLP SLPACAASKS GQMGLRRLGQ PQPFDFATLK GQARALAQAP
YKSHKRVLPG RLEGLDWDQY QSIGYRQDHA LWADQPGKFQ AKFFHLGLYF HSPVRMFDVV
DGKAQELAYD GAAFNYGKSG IKDGELPADL GFAGFRLNTR KDTDRDFAAF LGASYFRAVG
KEGQYGQSAR GLAIDTGMGK PEEFPDFIAY YLEQPSADSE TIVVYGLLDS PSVAGAYRFA
ITNGDVLLMD IDSALYPRKA IERLGIAPCT SMYQVGENDR RMAWDWRPEI HDTDGLSLWT
GAGEWIWRPL LNPRNLRFNM FVDRNPRGFG LLQRDRNFDH YQDDGVFYEK RPCLWVEPKG
EWGEGSVQLV EIPTVDETFD NIVAFWNPKE KPQPGQELLV GYRLYWGAEP PARPPLAHCV
ASRTGLGGVV GKKREYFSWR FAVDFEGGEL ARLIDKGEVE AVVEASRGRV EIVSARPLRE
INGYRAMFDL VPPEGSTEQI DIRLFLRSGG KTLTETWLYQ YTPPPAGAPE RTLY