OPGD_XYLF2
ID OPGD_XYLF2 Reviewed; 534 AA.
AC B2IAA4;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-JUN-2008, sequence version 1.
DT 25-MAY-2022, entry version 61.
DE RecName: Full=Glucans biosynthesis protein D {ECO:0000255|HAMAP-Rule:MF_01068};
DE Flags: Precursor;
GN Name=opgD {ECO:0000255|HAMAP-Rule:MF_01068};
GN OrderedLocusNames=XfasM23_2144;
OS Xylella fastidiosa (strain M23).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Xylella.
OX NCBI_TaxID=405441;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M23;
RX PubMed=20601474; DOI=10.1128/jb.00651-10;
RA Chen J., Xie G., Han S., Chertkov O., Sims D., Civerolo E.L.;
RT "Whole genome sequences of two Xylella fastidiosa strains (M12 and M23)
RT causing almond leaf scorch disease in California.";
RL J. Bacteriol. 192:4534-4534(2010).
CC -!- FUNCTION: Probably involved in the control of the structural glucose
CC backbone of osmoregulated periplasmic glucans (OPGs).
CC {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PATHWAY: Glycan metabolism; osmoregulated periplasmic glucan (OPG)
CC biosynthesis. {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the OpgD/OpgG family. {ECO:0000255|HAMAP-
CC Rule:MF_01068}.
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DR EMBL; CP001011; ACB93540.1; -; Genomic_DNA.
DR RefSeq; WP_004087424.1; NC_010577.1.
DR AlphaFoldDB; B2IAA4; -.
DR SMR; B2IAA4; -.
DR EnsemblBacteria; ACB93540; ACB93540; XfasM23_2144.
DR GeneID; 58017556; -.
DR KEGG; xfn:XfasM23_2144; -.
DR HOGENOM; CLU_023403_2_0_6; -.
DR OMA; DVQFFHV; -.
DR UniPathway; UPA00637; -.
DR Proteomes; UP000001698; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009250; P:glucan biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR HAMAP; MF_01068; MdoD_OpgD; 1.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR023724; Glucan_biosyn_MdoD.
DR InterPro; IPR014438; Glucan_biosyn_MdoG/MdoD.
DR InterPro; IPR007444; Glucan_biosyn_MdoG_C.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR PANTHER; PTHR30504; PTHR30504; 1.
DR Pfam; PF04349; MdoG; 1.
DR PIRSF; PIRSF006281; MdoG; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
PE 3: Inferred from homology;
KW Periplasm; Signal.
FT SIGNAL 1..28
FT /note="Tat-type signal"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01068"
FT CHAIN 29..534
FT /note="Glucans biosynthesis protein D"
FT /id="PRO_1000213470"
SQ SEQUENCE 534 AA; 61348 MW; C197101FEE936A3E CRC64;
MYRRDFLKSV TAAWVAFGLP NPLGGAFATN RVIPLRRLGQ SQRFDYEWLK ERARALAATP
YHSRKRVLPT PLERLSWDQY QSIRYRQDHA LWADSDAHFQ VKFFHLGLYF HSPVRMYEVV
DGMAQELAYD PAAFDYGSSG LNGKGLPKDL GFAGFRLNTR KDIDRDFAAF LGASYFRAVG
QEGQYGQSAR GLAVNTGSSG PEEFPDFIAY YLEQPTADAD TVVMYGLLDS PSIAGAYRFS
ITHADVLRMD IDSALYPRET IERLGIAPCT SMYQVGENDR RMGWDWRPEI HDTDGLFLWT
GNGEWIWRPL CNPLHLRFNM FLDNNPRGFG LLQRDRDFDH YQDDGVFYEK RPCLWVEPKH
GWGEGSVQLV EIPTFDETFD NIVAFWNPRN KPHPGQELLF GYRLYWGAFP PVSSSLAYCV
ATRTGLGGVV GQKRKYFSWR FAVDFVGGKL AALARVHDVS VEPVLHMTRG RPEIVSARPL
HEIRGYRVMF DVVPLEDSAQ QIDIRLYLRD TNGEPLTETW LYQWVPPILE ERKY