OPGD_XYLFA
ID OPGD_XYLFA Reviewed; 537 AA.
AC Q9PA38;
DT 03-JUL-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 93.
DE RecName: Full=Glucans biosynthesis protein D;
DE Flags: Precursor;
GN Name=opgD; OrderedLocusNames=XF_2682;
OS Xylella fastidiosa (strain 9a5c).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Xylella.
OX NCBI_TaxID=160492;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=9a5c;
RX PubMed=10910347; DOI=10.1038/35018003;
RA Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M.,
RA Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S.,
RA Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S.,
RA Bueno M.R.P., Camargo A.A., Camargo L.E.A., Carraro D.M., Carrer H.,
RA Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M.,
RA Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H.,
RA Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S.,
RA Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H.,
RA Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D.,
RA Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E.,
RA Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F.,
RA Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N.,
RA Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F.,
RA Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y.,
RA Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O.,
RA Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A.,
RA de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R.,
RA Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B.,
RA Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G.,
RA Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M.,
RA da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z.,
RA Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D.,
RA Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S.,
RA Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C.;
RT "The genome sequence of the plant pathogen Xylella fastidiosa.";
RL Nature 406:151-159(2000).
CC -!- FUNCTION: Probably involved in the control of the structural glucose
CC backbone of osmoregulated periplasmic glucans (OPGs). {ECO:0000250}.
CC -!- PATHWAY: Glycan metabolism; osmoregulated periplasmic glucan (OPG)
CC biosynthesis.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000250}.
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the OpgD/OpgG family. {ECO:0000305}.
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DR EMBL; AE003849; AAF85479.1; -; Genomic_DNA.
DR PIR; A82527; A82527.
DR AlphaFoldDB; Q9PA38; -.
DR SMR; Q9PA38; -.
DR STRING; 160492.XF_2682; -.
DR PRIDE; Q9PA38; -.
DR EnsemblBacteria; AAF85479; AAF85479; XF_2682.
DR KEGG; xfa:XF_2682; -.
DR eggNOG; COG3131; Bacteria.
DR HOGENOM; CLU_023403_2_0_6; -.
DR OMA; DVQFFHV; -.
DR UniPathway; UPA00637; -.
DR Proteomes; UP000000812; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009250; P:glucan biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR HAMAP; MF_01068; MdoD_OpgD; 1.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR023724; Glucan_biosyn_MdoD.
DR InterPro; IPR014438; Glucan_biosyn_MdoG/MdoD.
DR InterPro; IPR007444; Glucan_biosyn_MdoG_C.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR PANTHER; PTHR30504; PTHR30504; 1.
DR Pfam; PF04349; MdoG; 1.
DR PIRSF; PIRSF006281; MdoG; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
PE 3: Inferred from homology;
KW Periplasm; Reference proteome; Signal.
FT SIGNAL 1..36
FT /note="Tat-type signal"
FT /evidence="ECO:0000255"
FT CHAIN 37..537
FT /note="Glucans biosynthesis protein D"
FT /id="PRO_0000020218"
SQ SEQUENCE 537 AA; 61552 MW; CC46ED53F8A27367 CRC64;
MLMYRRDFLK SVTAAWVAFG LPNPLGGPFA TNRVIALRRL GQSQRFDYEW LKEHARALAA
APYHSRKRVL PTPLERLSWD QYQSIRYRQD HALWADSDAH FQVKFFHLGL YFHSPVRMYE
VVDGMAQELA YDPAAFDYGS SGLNGKRLPK DLGFAGFRLN TRKDTDRDFA AFLGASYFRA
VGQEGQYGQS ARGLAVNTGS SGPEEFPDFI AYYLEQPTSD ADTVVLYGLL DSPSIAGAYR
FSITNGDVLL MDIDSALYPR ETIERLGIAP CTSMYQVGEN DRRMGWDWRP EIHDTDGLFL
LTGNGEWIWR PLCNPPYLRF NMFLDNNPRG FGLLQRDRDF DHYQDDGVFY EKRPCLWVEP
KHGWGEGSVQ LVEIPTFDET FDNIVSFWNP RNKPHPGQEL LFGYRLYWGG LPPVSSSLAY
CVATRTGLGG VVGQKRKYFS WRFAVDFVGG KLAALASVHD VSVEPVLHMT RGRAEIVSAR
PLHEIRGYRV MFDVVPLEDS TQQIDIRLYL RDTNGEPLTE TWLYQWMPPI LEERKMY