OPGD_XYLFM
ID OPGD_XYLFM Reviewed; 537 AA.
AC B0U613;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 08-APR-2008, sequence version 1.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=Glucans biosynthesis protein D {ECO:0000255|HAMAP-Rule:MF_01068};
DE Flags: Precursor;
GN Name=opgD {ECO:0000255|HAMAP-Rule:MF_01068};
GN OrderedLocusNames=Xfasm12_2234;
OS Xylella fastidiosa (strain M12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Xylella.
OX NCBI_TaxID=405440;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M12;
RX PubMed=20601474; DOI=10.1128/jb.00651-10;
RA Chen J., Xie G., Han S., Chertkov O., Sims D., Civerolo E.L.;
RT "Whole genome sequences of two Xylella fastidiosa strains (M12 and M23)
RT causing almond leaf scorch disease in California.";
RL J. Bacteriol. 192:4534-4534(2010).
CC -!- FUNCTION: Probably involved in the control of the structural glucose
CC backbone of osmoregulated periplasmic glucans (OPGs).
CC {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PATHWAY: Glycan metabolism; osmoregulated periplasmic glucan (OPG)
CC biosynthesis. {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000255|HAMAP-Rule:MF_01068}.
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the OpgD/OpgG family. {ECO:0000255|HAMAP-
CC Rule:MF_01068}.
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DR EMBL; CP000941; ACA13085.1; -; Genomic_DNA.
DR AlphaFoldDB; B0U613; -.
DR SMR; B0U613; -.
DR KEGG; xfm:Xfasm12_2234; -.
DR HOGENOM; CLU_023403_2_0_6; -.
DR OMA; DVQFFHV; -.
DR UniPathway; UPA00637; -.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009250; P:glucan biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR HAMAP; MF_01068; MdoD_OpgD; 1.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR023724; Glucan_biosyn_MdoD.
DR InterPro; IPR014438; Glucan_biosyn_MdoG/MdoD.
DR InterPro; IPR007444; Glucan_biosyn_MdoG_C.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR006311; TAT_signal.
DR PANTHER; PTHR30504; PTHR30504; 1.
DR Pfam; PF04349; MdoG; 1.
DR PIRSF; PIRSF006281; MdoG; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
DR PROSITE; PS51318; TAT; 1.
PE 3: Inferred from homology;
KW Periplasm; Signal.
FT SIGNAL 1..30
FT /note="Tat-type signal"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01068"
FT CHAIN 31..537
FT /note="Glucans biosynthesis protein D"
FT /id="PRO_1000136606"
SQ SEQUENCE 537 AA; 61579 MW; A7FD0982850BA8F5 CRC64;
MLMYRRDFLK SVTAAWVAFG LPNPLGGAFA TNRVIALRRL GQSQRFDYEL LKERARALAA
APYHSRKRVL PTPLERLSWD QYQSIRYRQD HALWADSDAH FQVKFFHLGL YFHSPVRMYE
VVDGMAQELA YDPAAFDYGS SGLNGKGLPK DLGFAGFRLN TRKDTDRDFA AFLGASYFRA
VGQEGQYGQS ARGLAVNTGS SGPEEFPDFI AYYLEQPTSD ADTVVMYGLL DSPSIAGAYR
FSITHADVLR MDIDSALYPR ETIERLGIAP CTSMYQVGEN DRRMGWDWRP EIHDTDGLFL
WTGNGEWIWR PLCNPLHLRF NMFLDNNPRG FGLLQRDRDF DHYQDDGVFY EKRPCLWVEP
KHGWGEGSVQ LVEIPTFDET FDNIVAFWNP RNKPHPGQEL LFGYRLYWGA LPPVSSSLAY
CVATRTGLGG VVGQKRKYFS WRFAVDFVGG KLAALARVHD VSVEPVLHMT RGRPEIVSAR
PLHEIRGYRV MFDVVPLEDS AQQIDIRLYL RDTNGEPLTE TWLYQWMPPI LEERKIY