OPGD_XYLFT
ID OPGD_XYLFT Reviewed; 536 AA.
AC Q879Z7;
DT 03-JUL-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 25-MAY-2022, entry version 92.
DE RecName: Full=Glucans biosynthesis protein D;
DE Flags: Precursor;
GN Name=opgD; OrderedLocusNames=PD_2042;
OS Xylella fastidiosa (strain Temecula1 / ATCC 700964).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Xylella.
OX NCBI_TaxID=183190;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Temecula1 / ATCC 700964;
RX PubMed=12533478; DOI=10.1128/jb.185.3.1018-1026.2003;
RA Van Sluys M.A., de Oliveira M.C., Monteiro-Vitorello C.B., Miyaki C.Y.,
RA Furlan L.R., Camargo L.E.A., da Silva A.C.R., Moon D.H., Takita M.A.,
RA Lemos E.G.M., Machado M.A., Ferro M.I.T., da Silva F.R., Goldman M.H.S.,
RA Goldman G.H., Lemos M.V.F., El-Dorry H., Tsai S.M., Carrer H.,
RA Carraro D.M., de Oliveira R.C., Nunes L.R., Siqueira W.J., Coutinho L.L.,
RA Kimura E.T., Ferro E.S., Harakava R., Kuramae E.E., Marino C.L.,
RA Giglioti E., Abreu I.L., Alves L.M.C., do Amaral A.M., Baia G.S.,
RA Blanco S.R., Brito M.S., Cannavan F.S., Celestino A.V., da Cunha A.F.,
RA Fenille R.C., Ferro J.A., Formighieri E.F., Kishi L.T., Leoni S.G.,
RA Oliveira A.R., Rosa V.E. Jr., Sassaki F.T., Sena J.A.D., de Souza A.A.,
RA Truffi D., Tsukumo F., Yanai G.M., Zaros L.G., Civerolo E.L.,
RA Simpson A.J.G., Almeida N.F. Jr., Setubal J.C., Kitajima J.P.;
RT "Comparative analyses of the complete genome sequences of Pierce's disease
RT and citrus variegated chlorosis strains of Xylella fastidiosa.";
RL J. Bacteriol. 185:1018-1026(2003).
CC -!- FUNCTION: Probably involved in the control of the structural glucose
CC backbone of osmoregulated periplasmic glucans (OPGs). {ECO:0000250}.
CC -!- PATHWAY: Glycan metabolism; osmoregulated periplasmic glucan (OPG)
CC biosynthesis.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000250}.
CC -!- PTM: Predicted to be exported by the Tat system. The position of the
CC signal peptide cleavage has not been experimentally proven.
CC -!- SIMILARITY: Belongs to the OpgD/OpgG family. {ECO:0000305}.
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DR EMBL; AE009442; AAO29866.1; -; Genomic_DNA.
DR AlphaFoldDB; Q879Z7; -.
DR SMR; Q879Z7; -.
DR EnsemblBacteria; AAO29866; AAO29866; PD_2042.
DR KEGG; xft:PD_2042; -.
DR HOGENOM; CLU_023403_2_0_6; -.
DR OMA; DVQFFHV; -.
DR UniPathway; UPA00637; -.
DR Proteomes; UP000002516; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0009250; P:glucan biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.70.98.10; -; 1.
DR HAMAP; MF_01068; MdoD_OpgD; 1.
DR InterPro; IPR011013; Gal_mutarotase_sf_dom.
DR InterPro; IPR014718; GH-type_carb-bd.
DR InterPro; IPR023724; Glucan_biosyn_MdoD.
DR InterPro; IPR014438; Glucan_biosyn_MdoG/MdoD.
DR InterPro; IPR007444; Glucan_biosyn_MdoG_C.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR006311; TAT_signal.
DR PANTHER; PTHR30504; PTHR30504; 1.
DR Pfam; PF04349; MdoG; 1.
DR PIRSF; PIRSF006281; MdoG; 1.
DR SUPFAM; SSF74650; SSF74650; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
DR PROSITE; PS51318; TAT; 1.
PE 3: Inferred from homology;
KW Periplasm; Signal.
FT SIGNAL 1..30
FT /note="Tat-type signal"
FT /evidence="ECO:0000255"
FT CHAIN 31..536
FT /note="Glucans biosynthesis protein D"
FT /id="PRO_0000020219"
SQ SEQUENCE 536 AA; 61593 MW; FE770362EE937E81 CRC64;
MLMYRRDFLK SVTAAWVAFG LPNPLGGAFA TNRVIPLRRL GQSQRFDYEW LKERARALAA
TPYHSRKRVL PTPLERLSWD QYQSIRYRQD HALWADSDAH FQVKFFHLGL YFHSPVRMYE
VVDGMAQELA YDPAAFDYGS SGLNGKGLPK DLGFAGFRLN TRKDIDRDFA AFLGASYFRA
VGQEGQYGQS ARGLAVNTGS SGPEEFPDFI AYYLEQPTAD ADTVVMYGLL DSPSIAGAYR
FSITHADVLR MDIDSALYPR ETIERLGIAP CTSMYQVGEN DRRMGWDWRP EIHDTDGLFL
WTGNGEWIWR PLCNPLHLRF NMFLDNNPRG FGLLQRDRDF DHYQDDGVFY EKRPCLWVEP
KHGWGEGSVQ LVEIPTFDET FDNIVAFWNP RNKPHPGQEL LFGYRLYWGA FPPVSSSLAY
CVATRTGLGG VVGQKRKYFS WRFAVDFVGG KLAALARVHD VSVEPVLHMT RGRPEIVSAR
PLHEIRGYRV MFDVVPLEDS AQQIDIRLYL RDTNGEPLTE TWLYQWVPPI LEERKY