OPR9_ORYSJ
ID OPR9_ORYSJ Reviewed; 412 AA.
AC Q5ZC83; A0A0P0V2P6;
DT 28-JUN-2011, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Putative 12-oxophytodienoate reductase 9;
DE EC=1.3.1.-;
DE AltName: Full=OPDA-reductase 9;
DE Short=OsOPR9;
GN Name=OPR9; OrderedLocusNames=Os01g0370000, LOC_Os01g27240;
GN ORFNames=P0043B10.48, P0493G01.8;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Putative oxophytodienoate reductase that may be involved in
CC the biosynthesis or metabolism of oxylipin signaling molecules.
CC {ECO:0000250}.
CC -!- COFACTOR:
CC Name=FMN; Xref=ChEBI:CHEBI:58210;
CC -!- SIMILARITY: Belongs to the NADH:flavin oxidoreductase/NADH oxidase
CC family. {ECO:0000305}.
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DR EMBL; AP002914; BAD61319.1; -; Genomic_DNA.
DR EMBL; AP003236; BAD61457.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS72171.1; -; Genomic_DNA.
DR EMBL; AK121554; -; NOT_ANNOTATED_CDS; mRNA.
DR AlphaFoldDB; Q5ZC83; -.
DR SMR; Q5ZC83; -.
DR STRING; 4530.OS01T0370000-01; -.
DR PaxDb; Q5ZC83; -.
DR PRIDE; Q5ZC83; -.
DR EnsemblPlants; Os01t0370000-01; Os01t0370000-01; Os01g0370000.
DR Gramene; Os01t0370000-01; Os01t0370000-01; Os01g0370000.
DR eggNOG; KOG0134; Eukaryota.
DR HOGENOM; CLU_012153_0_2_1; -.
DR InParanoid; Q5ZC83; -.
DR OMA; SYGSMPQ; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR Genevisible; Q5ZC83; OS.
DR GO; GO:0010181; F:FMN binding; IEA:InterPro.
DR GO; GO:0016491; F:oxidoreductase activity; IBA:GO_Central.
DR GO; GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0031408; P:oxylipin biosynthetic process; IEA:UniProtKB-KW.
DR Gene3D; 3.20.20.70; -; 2.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR001155; OxRdtase_FMN_N.
DR InterPro; IPR045247; Oye-like.
DR PANTHER; PTHR22893; PTHR22893; 1.
DR Pfam; PF00724; Oxidored_FMN; 2.
PE 2: Evidence at transcript level;
KW Fatty acid biosynthesis; Fatty acid metabolism; Flavoprotein; FMN;
KW Lipid biosynthesis; Lipid metabolism; NADP; Oxidoreductase;
KW Oxylipin biosynthesis; Reference proteome.
FT CHAIN 1..412
FT /note="Putative 12-oxophytodienoate reductase 9"
FT /id="PRO_0000410715"
FT REGION 339..412
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 25..27
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0000250"
FT BINDING 58
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0000250"
FT BINDING 177
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0000250"
FT BINDING 242..245
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 294
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0000250"
FT BINDING 334
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 379..380
FT /ligand="FMN"
FT /ligand_id="ChEBI:CHEBI:58210"
FT /evidence="ECO:0000250"
FT CONFLICT 70
FT /note="K -> E (in Ref. 4; AK121554)"
FT /evidence="ECO:0000305"
FT CONFLICT 209
FT /note="P -> R (in Ref. 4; AK121554)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 412 AA; 45102 MW; 6587B36485C7C249 CRC64;
MEDTHLLTPY KMGQLNLAHR IVHAPVSRFR SYGSMPQPHN LLYYAQRATP GALLIAEASA
VSYAALGRSK DDAANGPIHR QRPGPPGFLF GTNLTDYNSA TDGVKATESG VNDRNNLSKW
WFMSRLNESG NAGGAEESHY TLPSSLDAPG LWNQEQIEAW RPIVDAVHAK GALFFCQIWH
NGRVFSTDNP VTPQVSYFGN TDDLAPAAPQ RLETGEIVQI VEDFRVAARN AIKAGFDGVE
IHAANGHLLH QFMKASVNDR TDEYGGSVEN RCRITVDAMS AVAEEIGADR VGVRLSPFAD
HCREEGTDPE EVALHLIGVM NGLGVLYCHV IEPRCMREQH RGAPRAPQRP APPAPVQKGV
PRHVHCERRV RPGGRGQGGR RRLRRPGVVR EIVPGQPRPA GEVQAEGGSE RV