ORN_BIFLO
ID ORN_BIFLO Reviewed; 216 AA.
AC Q8G3N5;
DT 13-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Oligoribonuclease {ECO:0000255|HAMAP-Rule:MF_00045};
DE EC=3.1.15.- {ECO:0000255|HAMAP-Rule:MF_00045};
GN Name=orn {ECO:0000255|HAMAP-Rule:MF_00045}; OrderedLocusNames=BL1723;
OS Bifidobacterium longum (strain NCC 2705).
OC Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
OC Bifidobacterium.
OX NCBI_TaxID=206672;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCC 2705;
RX PubMed=12381787; DOI=10.1073/pnas.212527599;
RA Schell M.A., Karmirantzou M., Snel B., Vilanova D., Berger B., Pessi G.,
RA Zwahlen M.-C., Desiere F., Bork P., Delley M., Pridmore R.D., Arigoni F.;
RT "The genome sequence of Bifidobacterium longum reflects its adaptation to
RT the human gastrointestinal tract.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:14422-14427(2002).
CC -!- FUNCTION: 3'-to-5' exoribonuclease specific for small
CC oligoribonucleotides. {ECO:0000255|HAMAP-Rule:MF_00045}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00045}.
CC -!- SIMILARITY: Belongs to the oligoribonuclease family.
CC {ECO:0000255|HAMAP-Rule:MF_00045}.
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DR EMBL; AE014295; AAN25507.1; -; Genomic_DNA.
DR RefSeq; NP_696871.1; NC_004307.2.
DR RefSeq; WP_007052450.1; NC_004307.2.
DR AlphaFoldDB; Q8G3N5; -.
DR SMR; Q8G3N5; -.
DR STRING; 206672.BL1723; -.
DR PRIDE; Q8G3N5; -.
DR EnsemblBacteria; AAN25507; AAN25507; BL1723.
DR GeneID; 66505782; -.
DR KEGG; blo:BL1723; -.
DR PATRIC; fig|206672.9.peg.1778; -.
DR HOGENOM; CLU_064761_3_0_11; -.
DR OMA; AFFHYRN; -.
DR PhylomeDB; Q8G3N5; -.
DR Proteomes; UP000000439; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd06135; Orn; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR HAMAP; MF_00045; Oligoribonuclease; 1.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR022894; Oligoribonuclease.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR11046; PTHR11046; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT CHAIN 1..216
FT /note="Oligoribonuclease"
FT /id="PRO_0000111018"
FT DOMAIN 17..182
FT /note="Exonuclease"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00045"
FT ACT_SITE 139
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00045"
SQ SEQUENCE 216 AA; 24303 MW; C4ED2F1DC35F8530 CRC64;
MVDSHDAETY SAKDSRLIWI DCEMTGLDIF GGDELVEVSV VPTDFDLNVL DEGVDYVIKP
SEKAVNHMND FVRQMHTRSG LINEWENGLS LAEAEQKVTE YVLRFTPEGV RPLLAGNTIG
SDKKFLDHYM PNLMSHLHYR SVDVSTFKEL ARRWYPAVYE NRPPKNGGHR ALADIIESLD
ELRYYRKAFM APAPGPDDAA SKAIAADIVA TSILNK