ORN_CAEEL
ID ORN_CAEEL Reviewed; 193 AA.
AC Q17819;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 129.
DE RecName: Full=Probable oligoribonuclease;
DE EC=3.1.15.-;
GN ORFNames=C08B6.8;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: 3'-to-5' exoribonuclease specific for small
CC oligoribonucleotides. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the oligoribonuclease family. {ECO:0000305}.
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DR EMBL; Z72502; CAA96590.1; -; Genomic_DNA.
DR PIR; T19081; T19081.
DR RefSeq; NP_001256185.1; NM_001269256.1.
DR AlphaFoldDB; Q17819; -.
DR SMR; Q17819; -.
DR BioGRID; 44442; 1.
DR STRING; 6239.C08B6.8a; -.
DR EPD; Q17819; -.
DR PaxDb; Q17819; -.
DR PeptideAtlas; Q17819; -.
DR EnsemblMetazoa; C08B6.8a.1; C08B6.8a.1; WBGene00007429.
DR GeneID; 179411; -.
DR KEGG; cel:CELE_C08B6.8; -.
DR UCSC; C08B6.8; c. elegans.
DR CTD; 179411; -.
DR WormBase; C08B6.8a; CE05245; WBGene00007429; -.
DR eggNOG; KOG3242; Eukaryota.
DR GeneTree; ENSGT00390000009255; -.
DR HOGENOM; CLU_064761_4_0_1; -.
DR InParanoid; Q17819; -.
DR OMA; AFFHYRN; -.
DR OrthoDB; 1079953at2759; -.
DR PhylomeDB; Q17819; -.
DR PRO; PR:Q17819; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00007429; Expressed in germ line (C elegans) and 4 other tissues.
DR ExpressionAtlas; Q17819; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0000175; F:3'-5'-exoribonuclease activity; IBA:GO_Central.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd06135; Orn; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR022894; Oligoribonuclease.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR11046; PTHR11046; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
PE 3: Inferred from homology;
KW Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT CHAIN 1..193
FT /note="Probable oligoribonuclease"
FT /id="PRO_0000111090"
FT DOMAIN 15..177
FT /note="Exonuclease"
FT ACT_SITE 136
FT /evidence="ECO:0000255"
SQ SEQUENCE 193 AA; 22396 MW; 4406B64441D3D818 CRC64;
MSTLYHTCDK IEQRIIWIDC EMTGLDVEKQ TLCEIALIVT DSELNTIATG PDIVIHQPKE
VLDNMEEWPR NTFHENGLME KIIASKYSMA DAENEVIDFL KLHALPGKSP IAGNSIYMDR
LFIKKYMPKL DKFAHYRCID VSTIKGLVQR WYPDYKHPKK QCTHRAFDDI MESIAELKNY
RESIFVKSTA SSF