ORN_NOCFA
ID ORN_NOCFA Reviewed; 216 AA.
AC Q5Z0A9;
DT 15-FEB-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 25-MAY-2022, entry version 93.
DE RecName: Full=Oligoribonuclease {ECO:0000255|HAMAP-Rule:MF_00045};
DE EC=3.1.15.- {ECO:0000255|HAMAP-Rule:MF_00045};
GN Name=orn {ECO:0000255|HAMAP-Rule:MF_00045}; OrderedLocusNames=NFA_12870;
OS Nocardia farcinica (strain IFM 10152).
OC Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.
OX NCBI_TaxID=247156;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IFM 10152;
RX PubMed=15466710; DOI=10.1073/pnas.0406410101;
RA Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K.,
RA Shiba T., Hattori M.;
RT "The complete genomic sequence of Nocardia farcinica IFM 10152.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
CC -!- FUNCTION: 3'-to-5' exoribonuclease specific for small
CC oligoribonucleotides. {ECO:0000255|HAMAP-Rule:MF_00045}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00045}.
CC -!- SIMILARITY: Belongs to the oligoribonuclease family.
CC {ECO:0000255|HAMAP-Rule:MF_00045}.
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DR EMBL; AP006618; BAD56132.1; -; Genomic_DNA.
DR RefSeq; WP_011207817.1; NC_006361.1.
DR AlphaFoldDB; Q5Z0A9; -.
DR SMR; Q5Z0A9; -.
DR STRING; 247156.NFA_12870; -.
DR EnsemblBacteria; BAD56132; BAD56132; NFA_12870.
DR GeneID; 61132107; -.
DR KEGG; nfa:NFA_12870; -.
DR eggNOG; COG1949; Bacteria.
DR HOGENOM; CLU_064761_3_0_11; -.
DR OMA; AFFHYRN; -.
DR Proteomes; UP000006820; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd06135; Orn; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR HAMAP; MF_00045; Oligoribonuclease; 1.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR022894; Oligoribonuclease.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR11046; PTHR11046; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT CHAIN 1..216
FT /note="Oligoribonuclease"
FT /id="PRO_0000111056"
FT DOMAIN 6..171
FT /note="Exonuclease"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00045"
FT ACT_SITE 128
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00045"
SQ SEQUENCE 216 AA; 23694 MW; 9057A2C4F7ADCC1E CRC64;
MSDKLVVWMD CEMTGLRLDS DKLIEVSALV TDSDLNILGD GVDIVIHADD AALAAMPPVV
AEMHARSGLT DEVRRSTVTV AEAEQQVLDY IRQYVPTPRT VPLAGNSIAT DRAFIARDMP
ALDAHLHYRM IDVSSIKELC RRWYPRIYFG QPEKGLTHRA LADIKESIRE LEYYRRTAFV
APPGPSTAEI AAVAAQLGGT AQTAESPQVE GTTQAD