ORR27_ORYSJ
ID ORR27_ORYSJ Reviewed; 620 AA.
AC Q75HW2; A0A0P0WM15;
DT 16-SEP-2015, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Two-component response regulator ORR27 {ECO:0000305};
DE AltName: Full=OsRRA16 {ECO:0000303|PubMed:16891544};
GN Name=RR27 {ECO:0000303|PubMed:17284581};
GN OrderedLocusNames=Os05g0395600 {ECO:0000312|EMBL:AP008211},
GN LOC_Os05g32880 {ECO:0000305};
GN ORFNames=OSJNBa0014C03.14 {ECO:0000312|EMBL:AAT93905.1},
GN OSJNBb0092G21.3 {ECO:0000312|EMBL:AAT07636.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RG The rice full-length cDNA consortium;
RT "Oryza sativa full length cDNA.";
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP DISRUPTION PHENOTYPE.
RX PubMed=16891544; DOI=10.1104/pp.106.086371;
RA Pareek A., Singh A., Kumar M., Kushwaha H.R., Lynn A.M.,
RA Singla-Pareek S.L.;
RT "Whole-genome analysis of Oryza sativa reveals similar architecture of two-
RT component signaling machinery with Arabidopsis.";
RL Plant Physiol. 142:380-397(2006).
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=17284581; DOI=10.1104/pp.106.093666;
RA Schaller G.E., Doi K., Hwang I., Kieber J.J., Khurana J.P., Kurata N.,
RA Mizuno T., Pareek A., Shiu S.H., Wu P., Yip W.K.;
RT "Nomenclature for two-component signaling elements of rice.";
RL Plant Physiol. 143:555-557(2007).
CC -!- FUNCTION: Transcriptional activator that binds specific DNA sequence.
CC Functions as a response regulator involved in His-to-Asp phosphorelay
CC signal transduction system. Phosphorylation of the Asp residue in the
CC receiver domain activates the ability of the protein to promote the
CC transcription of target genes. May directly activate some type-A
CC response regulators in response to cytokinins.
CC {ECO:0000250|UniProtKB:Q940D0}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00625}.
CC -!- PTM: Two-component system major event consists of a His-to-Asp
CC phosphorelay between a sensor histidine kinase (HK) and a response
CC regulator (RR). In plants, the His-to-Asp phosphorelay involves an
CC additional intermediate named Histidine-containing phosphotransfer
CC protein (HPt). This multistep phosphorelay consists of a His-Asp-His-
CC Asp sequential transfer of a phosphate group between first an His and
CC an Asp of the HK protein, followed by the transfer to a conserved His
CC of the HPt protein and finally the transfer to an Asp in the receiver
CC domain of the RR protein. {ECO:0000305}.
CC -!- DISRUPTION PHENOTYPE: Dwarf, narrow leaf, lesion mimic, low tillering,
CC altered kernel color, viviparous and low fertility phenotypes.
CC {ECO:0000269|PubMed:16891544}.
CC -!- SIMILARITY: Belongs to the ARR family. Type-B subfamily. {ECO:0000305}.
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DR EMBL; AC132483; AAT93905.1; -; Genomic_DNA.
DR EMBL; AC134932; AAT07636.1; -; Genomic_DNA.
DR EMBL; AP008211; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP014961; BAS93882.1; -; Genomic_DNA.
DR EMBL; AK242722; BAH01325.1; -; mRNA.
DR RefSeq; XP_015639050.1; XM_015783564.1.
DR AlphaFoldDB; Q75HW2; -.
DR SMR; Q75HW2; -.
DR STRING; 4530.OS05T0395600-01; -.
DR PaxDb; Q75HW2; -.
DR PRIDE; Q75HW2; -.
DR EnsemblPlants; Os05t0395600-01; Os05t0395600-01; Os05g0395600.
DR GeneID; 107275887; -.
DR Gramene; Os05t0395600-01; Os05t0395600-01; Os05g0395600.
DR KEGG; osa:107275887; -.
DR eggNOG; KOG1601; Eukaryota.
DR HOGENOM; CLU_030138_0_0_1; -.
DR InParanoid; Q75HW2; -.
DR OMA; PPGCKLP; -.
DR OrthoDB; 332559at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q75HW2; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009736; P:cytokinin-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
DR InterPro; IPR045279; ARR-like.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR006447; Myb_dom_plants.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR PANTHER; PTHR43874; PTHR43874; 1.
DR Pfam; PF00072; Response_reg; 1.
DR SMART; SM00448; REC; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR SUPFAM; SSF52172; SSF52172; 1.
DR TIGRFAMs; TIGR01557; myb_SHAQKYF; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE 2: Evidence at transcript level;
KW Activator; Cytokinin signaling pathway; DNA-binding; Nucleus;
KW Phosphoprotein; Reference proteome; Transcription;
KW Transcription regulation; Two-component regulatory system.
FT CHAIN 1..620
FT /note="Two-component response regulator ORR27"
FT /id="PRO_0000433850"
FT DOMAIN 24..138
FT /note="Response regulatory"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00169"
FT DNA_BIND 261..321
FT /note="Myb-like GARP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00625"
FT REGION 171..197
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 215..257
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 431..457
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 501..523
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 596..620
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 603..620
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 76
FT /note="4-aspartylphosphate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00169"
SQ SEQUENCE 620 AA; 66232 MW; 96037356B7C3C081 CRC64;
MAENNGAVPP GCKLPAGGFF GRLHVLVVDD DAAYLEELKL MLLLAGYAVT GKTTAEEALK
EVDQNPEDYF HIVMTDVHMS GMDGFDLLHR INGRVPVIMF SEGEDVVMVM RTVMNGACDY
MVKPMTSEAI KFIWKHVLRW RLSALPANAS SSLQPSDHLA AALAAVAPPP PPAVQLPAAP
AQAGNRDGEA HEEAELSTQP PALVPSGVQE AAAAVWSSRG DGQEAPPPAV AAAAKAPSKK
RGASEVSDRG SNNLEATTGR KKVRTRFTWT TVSHTSFVRA YEQLKDQEGP KKIKQLMELD
GIFVTKTQVS SHLQKYRSWL ENERKKEEAT SSSPCNPLSY TNCLDRGYST WKQSSVITEG
QQSSSFSGRP IHSMATSNGC LTTTDTQAGN YVGVGAKEIE NFISSHQRSL GTAIGQESTI
EQASLHSEIT SVSRDAHENG NSQARGSAMS NGTSGTRGVL VTNENLLHVV SASLPSNMGQ
PTQPSQSFCT NELAANYSII SDQNPGTSHP TSSSAINNQN SKTQEMSVSQ TVELGCGNDV
MLDWPELVGL EDQLDNDVLM NSFFDGDLLQ QGVVTAIDGT QEMLAFDSTG DLGSVPPRGL
NNEIASHENT NGKNGASSGP
