OTP_LYTVA
ID OTP_LYTVA Reviewed; 360 AA.
AC Q6SZ65;
DT 26-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 80.
DE RecName: Full=Homeobox protein orthopedia;
GN Name=Otp;
OS Lytechinus variegatus (Green sea urchin) (Echinus variegatus).
OC Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea;
OC Euechinoidea; Echinacea; Temnopleuroida; Toxopneustidae; Lytechinus.
OX NCBI_TaxID=7654;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Bradham C.A., Miranda E.L., McClay D.R.;
RT "The pathway p38 MAPK-Goosecoid-Orthopedia is required for axis
RT specification in the sea urchin embryo.";
RL Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00108,
CC ECO:0000255|PROSITE-ProRule:PRU00138}.
CC -!- SIMILARITY: Belongs to the paired homeobox family. Bicoid subfamily.
CC {ECO:0000305}.
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DR EMBL; AY445031; AAR17090.1; -; mRNA.
DR AlphaFoldDB; Q6SZ65; -.
DR SMR; Q6SZ65; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR InterPro; IPR003654; OAR_dom.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF03826; OAR; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50803; OAR; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; DNA-binding; Homeobox; Nucleus; Transcription;
KW Transcription regulation.
FT CHAIN 1..360
FT /note="Homeobox protein orthopedia"
FT /id="PRO_0000292436"
FT DNA_BIND 112..171
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 48..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 295..326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 340..353
FT /note="OAR"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00138"
FT COMPBIAS 48..62
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 360 AA; 37733 MW; 35B265463F731BE8 CRC64;
MERTLAHVPS MELSTEALLV TGGLDNTNKM ITSSAVRNDD GTMISQHSEK VSYGTSGAPD
GSTPPVTAAG GGSEGNGIGG GGGGGGGMVG DGTGHSVGSS ASGNDDDKPA KQKRHRTRFT
PAQLNELERN FAKTHYPDIF MREEIAMRVG LTESRVQVWF QNRRAKWKKR KKTTNVFRTP
GALLPSHGLA QFPSPMNDSF CNFHGQDTRG WPAMSGMTTH MAPHMTTHMP SHQMSQMGGG
PGSALALPPS IPRQGLGQSM QQQTVNCTMG QSTGLNTLSM GTNGSMGSMT SMYQPSLGGM
TTGSMSSGLS SPSPPNLPVS DSSTDLSCSV SDAGDMWRGT SIASLRRKAL EHAASLNGNL