OTP_PARLI
ID OTP_PARLI Reviewed; 364 AA.
AC O76971;
DT 15-JUL-1999, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1998, sequence version 1.
DT 25-MAY-2022, entry version 91.
DE RecName: Full=Homeobox protein orthopedia;
DE AltName: Full=Orthopedia-related;
DE AltName: Full=PlOtp;
GN Name=OTP;
OS Paracentrotus lividus (Common sea urchin).
OC Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea;
OC Euechinoidea; Echinacea; Camarodonta; Echinidea; Echinidae; Paracentrotus.
OX NCBI_TaxID=7656;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, AND
RP FUNCTION.
RX PubMed=10207142; DOI=10.1242/dev.126.10.2171;
RA Di Bernardo M., Castagnetti S., Bellomonte D., Oliveri P., Melfi R.,
RA Palla F., Spinelli G.;
RT "Spatially restricted expression of PlOtp, a Paracentrotus lividus
RT orthopedia-related homeobox gene, is correlated with oral ectodermal
RT patterning and skeletal morphogenesis in late-cleavage sea urchin
RT embryos.";
RL Development 126:2171-2179(1999).
RN [2]
RP FUNCTION.
RX PubMed=14512022; DOI=10.1016/s0012-1606(03)00317-8;
RA Cavalieri V., Spinelli G., Di Bernardo M.;
RT "Impairing Otp homeodomain function in oral ectoderm cells affects
RT skeletogenesis in sea urchin embryos.";
RL Dev. Biol. 262:107-118(2003).
CC -!- FUNCTION: Involved in larval skeletal patterning.
CC {ECO:0000269|PubMed:10207142, ECO:0000269|PubMed:14512022}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00108,
CC ECO:0000255|PROSITE-ProRule:PRU00138}.
CC -!- TISSUE SPECIFICITY: Expressed at low levels in lantern and tubefeet.
CC {ECO:0000269|PubMed:10207142}.
CC -!- DEVELOPMENTAL STAGE: Expression starts at the gastrula stage, increases
CC at the prism stage and peaks at the puteus larva stage. Expression is
CC restricted to the oral epithelium. {ECO:0000269|PubMed:10207142}.
CC -!- SIMILARITY: Belongs to the paired homeobox family. Bicoid subfamily.
CC {ECO:0000305}.
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DR EMBL; AJ007501; CAA07543.1; -; mRNA.
DR AlphaFoldDB; O76971; -.
DR SMR; O76971; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR InterPro; IPR003654; OAR_dom.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50803; OAR; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; DNA-binding; Homeobox; Nucleus; Transcription;
KW Transcription regulation.
FT CHAIN 1..364
FT /note="Homeobox protein orthopedia"
FT /id="PRO_0000049205"
FT DNA_BIND 116..175
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 35..120
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 303..330
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 344..357
FT /note="OAR"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00138"
FT COMPBIAS 35..59
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 364 AA; 38133 MW; 86658CCDD4D17E64 CRC64;
MERTLAHVPS MELSTEALLV TGGLDNTNKM ISSSAVRNDD GTMISQHSDK VSYGTSGAPD
GSTPPYPAGG VGEGNGIVGG GGGGGGGGGG GMVGDGTGHS VGSSGSGNDD DKPAKQKRHR
TRFTPAQLNE LERNFAKTHY PDIFMREEIA MRVGLTESRV QVWFQNRRAK WKKRKKTTNV
FRTPGALLPS HGLAQFPSPM NDSFCNFHGQ DTRGWPAMSG MTTHMAPHMT THMPSHQMPL
MGGGPGSALA LPPSLPRQGL GQSMQQQSVN CSMGQTTGLN TLSMGTNGSM GSMTSMYQPS
LGGMTTGSMS SGLSSPSPPN LPVTDSSTDL SCSVSDAGDM WRGTSIASLR RKLEHAASLN
GIFR