P19_TBSVC
ID P19_TBSVC Reviewed; 172 AA.
AC P11690;
DT 01-OCT-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1989, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=RNA silencing suppressor p19;
DE AltName: Full=19 kDa symptom severity modulator;
GN ORFNames=ORF4;
OS Tomato bushy stunt virus (strain Cherry) (TBSV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus.
OX NCBI_TaxID=12147;
OH NCBI_TaxID=4072; Capsicum annuum (Capsicum pepper).
OH NCBI_TaxID=3749; Malus.
OH NCBI_TaxID=3766; Pyrus (pears).
OH NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OH NCBI_TaxID=4111; Solanum melongena (Eggplant) (Aubergine).
OH NCBI_TaxID=29777; Tolmiea menziesii.
OH NCBI_TaxID=13305; Tulipa.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2922927; DOI=10.1016/0042-6822(89)90039-1;
RA Hillman B.I., Hearne P.Q., Rochon D., Morris T.J.;
RT "Organization of tomato bushy stunt virus genome: characterization of the
RT coat protein gene and the 3' terminus.";
RL Virology 169:42-50(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2353450; DOI=10.1016/0042-6822(90)90468-7;
RA Hearne P.Q., Knorr D.A., Hillman B.I., Morris T.J.;
RT "The complete genome structure and synthesis of infectious RNA from clones
RT of tomato bushy stunt virus.";
RL Virology 177:141-151(1990).
RN [3]
RP FUNCTION.
RX PubMed=10570213; DOI=10.1073/pnas.96.24.14147;
RA Voinnet O., Pinto Y.M., Baulcombe D.C.;
RT "Suppression of gene silencing: a general strategy used by diverse DNA and
RT RNA viruses of plants.";
RL Proc. Natl. Acad. Sci. U.S.A. 96:14147-14152(1999).
RN [4]
RP X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS) OF 23-158.
RX PubMed=14661029; DOI=10.1038/nature02213;
RA Ye K., Malinina L., Patel D.J.;
RT "Recognition of small interfering RNA by a viral suppressor of RNA
RT silencing.";
RL Nature 426:874-878(2003).
CC -!- FUNCTION: Acts as a suppressor of RNA-mediated gene silencing, also
CC known as post-transcriptional gene silencing (PTGS), a mechanism of
CC plant viral defense that limits the accumulation of viral RNAs. Binds
CC to short interfering RNAs (siRNAs) with high affinity. Acts as a
CC molecular caliper to specifically select siRNAs based on the length of
CC the duplex region of the RNA (By similarity). {ECO:0000250,
CC ECO:0000269|PubMed:10570213}.
CC -!- SUBUNIT: Homodimer.
CC -!- SIMILARITY: Belongs to the tombusviruses protein p19 family.
CC {ECO:0000305}.
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DR EMBL; M21958; AAB02538.1; -; Genomic_RNA.
DR PIR; JA0116; NKVGTD.
DR RefSeq; NP_062901.1; NC_001554.1.
DR PDB; 1R9F; X-ray; 1.85 A; A=27-158.
DR PDBsum; 1R9F; -.
DR SMR; P11690; -.
DR GeneID; 1493957; -.
DR KEGG; vg:1493957; -.
DR EvolutionaryTrace; P11690; -.
DR Proteomes; UP000001666; Genome.
DR GO; GO:0044423; C:virion component; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.390.180; -; 1.
DR InterPro; IPR004905; Tombusvirus_p19.
DR InterPro; IPR036131; VP19_sf.
DR Pfam; PF03220; Tombus_P19; 1.
DR SUPFAM; SSF103145; SSF103145; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; RNA-binding; Suppressor of RNA silencing.
FT CHAIN 1..172
FT /note="RNA silencing suppressor p19"
FT /id="PRO_0000222881"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..34
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT HELIX 39..48
FT /evidence="ECO:0007829|PDB:1R9F"
FT STRAND 57..65
FT /evidence="ECO:0007829|PDB:1R9F"
FT STRAND 68..75
FT /evidence="ECO:0007829|PDB:1R9F"
FT HELIX 80..87
FT /evidence="ECO:0007829|PDB:1R9F"
FT HELIX 92..100
FT /evidence="ECO:0007829|PDB:1R9F"
FT STRAND 109..116
FT /evidence="ECO:0007829|PDB:1R9F"
FT STRAND 119..126
FT /evidence="ECO:0007829|PDB:1R9F"
FT HELIX 127..129
FT /evidence="ECO:0007829|PDB:1R9F"
FT HELIX 130..145
FT /evidence="ECO:0007829|PDB:1R9F"
SQ SEQUENCE 172 AA; 19395 MW; C6CDD00B5C90AB96 CRC64;
MERAIQGNDA REQANSERWD GGSGGTTSPF KLPDESPSWT EWRLHNDETN SNQDNPLGFK
ESWGFGKVVF KRYLRYDRTE ASLHRVLGSW TGDSVNYAAS RFFGFDQIGC TYSIRFRGVS
ITVSGGSRTL QHLCEMAIRS KQELLQLAPI EVESNVSRGC PEGTETFEKE SE