ID   P2SAF_ORYSJ             Reviewed;         416 AA.
AC   Q5Z5A8;
DT   13-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT   23-NOV-2004, sequence version 1.
DT   03-AUG-2022, entry version 72.
DE   RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic;
DE   Flags: Precursor;
GN   Name=HCF136; OrderedLocusNames=Os06g0729500, LOC_Os06g51330;
GN   ORFNames=OSJNBa0069C14.15;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
CC   -!- FUNCTION: Essential for photosystem II (PSII) biogenesis; required for
CC       assembly of an early intermediate in PSII assembly that includes D2
CC       (psbD) and cytochrome b559. {ECO:0000250|UniProtKB:O82660}.
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid lumen
CC       {ECO:0000250|UniProtKB:O82660}. Note=Restricted to the stromal lamelae.
CC       Translocation into the thylakoid lumen occurs via the Tat pathway (By
CC       similarity). The position of the signal peptide cleavage has not been
CC       experimentally proven (By similarity). {ECO:0000250|UniProtKB:O82660,
CC       ECO:0000255|PROSITE-ProRule:PRU00648}.
CC   -!- DOMAIN: A 7-bladed beta-propeller torus, about 54 by 55 Angstroms, with
CC       a depth of about 25 Angstroms and a central pore.
CC       {ECO:0000250|UniProtKB:M1VJU3}.
CC   -!- SIMILARITY: Belongs to the Ycf48 family. {ECO:0000305}.
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DR   EMBL; AP005750; BAD62115.1; -; Genomic_DNA.
DR   EMBL; AP014962; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; Q5Z5A8; -.
DR   SMR; Q5Z5A8; -.
DR   STRING; 4530.OS06T0729650-00; -.
DR   PRIDE; Q5Z5A8; -.
DR   eggNOG; KOG3511; Eukaryota.
DR   HOGENOM; CLU_057027_0_0_1; -.
DR   InParanoid; Q5Z5A8; -.
DR   Proteomes; UP000000763; Chromosome 6.
DR   Proteomes; UP000059680; Chromosome 6.
DR   GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0009523; C:photosystem II; IEA:UniProtKB-KW.
DR   GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR   Gene3D; 2.130.10.10; -; 1.
DR   InterPro; IPR028203; PSII_CF48-like_dom.
DR   InterPro; IPR006311; TAT_signal.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   Pfam; PF14870; PSII_BNR; 1.
DR   PROSITE; PS51318; TAT; 1.
PE   3: Inferred from homology;
KW   Chloroplast; Photosynthesis; Photosystem II; Plastid; Reference proteome;
KW   Thylakoid; Transit peptide.
FT   TRANSIT         1..36
FT                   /note="Chloroplast"
FT                   /evidence="ECO:0000255"
FT   TRANSIT         37..67
FT                   /note="Thylakoid"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00648"
FT   CHAIN           68..416
FT                   /note="Photosystem II stability/assembly factor HCF136,
FT                   chloroplastic"
FT                   /id="PRO_0000239672"
SQ   SEQUENCE   416 AA;  45469 MW;  6CA9748662B0CB79 CRC64;
     MATTASLHLH LHLLLSSSRR RCRLLVPRAH TDSISTGRRR FIADTATASA AAAVGPLVLP
     RTPLARADQP PSLSEWERVL LPIDPGVVLL DIAFVPDDPS HGFLLGTRQT ILETKNGGNT
     WFPRSIPSAE DEDFNYRFNS VSFMGKEGWI IGKPAILLHT SDAGDSWERI PLSAQLPGNM
     VYIKATGEQS AEMVTDEGAI YVTSNRGYNW KAAVQETVSA TLNRTVSSGI SGASYYTGTF
     NTVNRSPDGR YVAVSSRGNF YLTWEPGQPF WQPHNRAVAR RIQNMGWRAD GGLWLLVRGG
     GLFLSKGSGF QFFYRGLNDA HAISYLHPPN QITEDFEEAS VQSRGFGILD VGYRSKDEAW
     AAGGSGVLLK TTNGGKTWVR DKAADNIAAN LYSVKFLGDN KGYVLGNDGV LLRYVG