P3_RDVF
ID P3_RDVF Reviewed; 1019 AA.
AC Q98630;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 12-AUG-2020, entry version 67.
DE RecName: Full=Outer capsid protein P3;
DE AltName: Full=Core protein P3;
OS Rice dwarf virus (isolate Fujian) (RDV).
OC Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes;
OC Reovirales; Reoviridae; Sedoreovirinae; Phytoreovirus.
OX NCBI_TaxID=142804;
OH NCBI_TaxID=114194; Alopecurus aequalis.
OH NCBI_TaxID=90397; Echinochloa crus-galli (Barnyard grass) (Panicum crus-galli).
OH NCBI_TaxID=94400; Nephotettix cincticeps (Green rice leafhopper) (Selenocephalus cincticeps).
OH NCBI_TaxID=4530; Oryza sativa (Rice).
OH NCBI_TaxID=147271; Paspalum.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=9385405;
RA Zhang F., Li Y., Liu Y., An C., Chen Z.;
RT "Molecular cloning, sequencing, functional analysis and expression in
RT E.coli of major core protein gene (S3) of rice dwarf virus Chinese
RT isolate.";
RL Acta Virol. 41:161-168(1997).
RN [2]
RP SUBCELLULAR LOCATION.
RX PubMed=16432031; DOI=10.1099/vir.0.81425-0;
RA Wei T., Shimizu T., Hagiwara K., Kikuchi A., Moriyasu Y., Suzuki N.,
RA Chen H., Omura T.;
RT "Pns12 protein of Rice dwarf virus is essential for formation of viroplasms
RT and nucleation of viral-assembly complexes.";
RL J. Gen. Virol. 87:429-438(2006).
CC -!- FUNCTION: Capsid protein which self-assembles to form the inner
CC icosahedral capsid with a T=2 symmetry, and consisting of 60 P3 dimers.
CC -!- SUBUNIT: Homodimer. Homomultimer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host cytoplasm
CC {ECO:0000269|PubMed:16432031}. Note=Found in the interior of spherical
CC cytoplasmic structures, called virus factories, that appear early after
CC infection and are the site of viral replication and packaging.
CC -!- SIMILARITY: Belongs to the phytoreovirus inner capsid protein P3
CC family. {ECO:0000305}.
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DR EMBL; U72757; AAB17618.1; -; Genomic_RNA.
DR RefSeq; NP_620543.1; NC_003772.1.
DR SMR; Q98630; -.
DR GeneID; 956504; -.
DR KEGG; vg:956504; -.
DR Proteomes; UP000002239; Genome.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0039624; C:viral outer capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR InterPro; IPR016029; Inner_layer_core_VP3_Reovir.
DR InterPro; IPR015312; Innr_layr_core_VP3_Phytoreovir.
DR Pfam; PF09231; RDV-p3; 1.
DR SUPFAM; SSF56831; SSF56831; 1.
PE 3: Inferred from homology;
KW Capsid protein; Host cytoplasm; Outer capsid protein; Reference proteome;
KW Virion.
FT CHAIN 1..1019
FT /note="Outer capsid protein P3"
FT /id="PRO_0000222783"
SQ SEQUENCE 1019 AA; 114104 MW; 59FF0A586C61E65B CRC64;
MDSTGRAYDG ASEFKSVLVT EGTSHYTPVE VYNILDELKT IKITSTIAEQ SVVSRTPIPL
SKIGLSDVKK LFDINVIKCG SSLRIVDEPQ VTFIVSYAKD IYDKFMCIEH DSAYEPSLTM
HRVRVIYSML NDYCAKMISE VPYESSFVGE LPVKSVTLNK LGDRNMDALA EHLLFEQDVV
NAQRENRIFY QRKSAPAVPV TFGDDLEPAV RERANLYHRY SVPYHQIELA LHALANDLLS
IQYCHPTVVY NYLSSRAPNF LRLDDQVSLK LTSAGIGTLM PRPVVQLLDY DLVYMSPLAL
NNLASRLLRK ISLHLVMQMV TAVQQDLGEV VSVSSNVTNP ASACLVRMNV QGVQTLAVFI
AQSMLNPNIS YGMLSGLTLD CFSNFIYGAC LMLFQALIPP SALTARQRLD INNRFAYFLI
KCHATQATTA SVVPNQVIYP VDAIDQWQSN RRDVLVAIYN NLLPGELVLS NLIQTYFRGN
TAQQAAEILI PADQTSYGAN ETRALSAPYL FGAPINMLAP DARLSTYKRD LALPDRSPIL
ITTVEGQNSI SIEILRHKTG LIRAMYLNGF VTQPPAWIRN ANSNTALLSR FLDVTPNLLG
IYEAILANTY ANAVNVYCDS VYRADIPTEW KLHQSVDPQD LLFGVFGIVP QYQILNEAVP
DFFAGGEDIL ILQLIRAVYD TLSNKLGRNP ADIFHLDEVF KVIEEIVSVL VQQKVDARKY
FTESMRSGSF SKPRWDNFLR RPVAQRLPNL DSVIMTQADH VYNYMTQLTH IIPITDCFYI
VKNSGFVDRG STGPVMASSS VYENVLKVVH TIADFEAANA LRLQRRSVDN TSYTDSLSDM
FNGLRSISSS EFVRSVNGRS VFTEGRIDAI KVNMRVKFDL QFITEEGGYS KPPNVKKLMF
SDFLSFLDSH KSDYRPPLLT VPITIGLNNL GETNSNTLRM RSEAIDEYFS SYVGAQILVP
INVVDTRVYT EFSELRNFFT GDVVITDDPF DVWDGVKATY IPIGVHGVRL DPNGDQPPL