P8_RDVF
ID P8_RDVF Reviewed; 421 AA.
AC Q85439;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 12-AUG-2020, entry version 82.
DE RecName: Full=Outer capsid protein P8;
DE AltName: Full=Structural protein P8;
DE Contains:
DE RecName: Full=Outer capsid protein P8';
DE Contains:
DE RecName: Full=Small peptide 1;
DE Short=Sp1;
OS Rice dwarf virus (isolate Fujian) (RDV).
OC Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes;
OC Reovirales; Reoviridae; Sedoreovirinae; Phytoreovirus.
OX NCBI_TaxID=142804;
OH NCBI_TaxID=114194; Alopecurus aequalis.
OH NCBI_TaxID=90397; Echinochloa crus-galli (Barnyard grass) (Panicum crus-galli).
OH NCBI_TaxID=94400; Nephotettix cincticeps (Green rice leafhopper) (Selenocephalus cincticeps).
OH NCBI_TaxID=4530; Oryza sativa (Rice).
OH NCBI_TaxID=147271; Paspalum.
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Li W., Li Y., Zhang X., Chu R., Chen Z.;
RT "Molecular cloning and sequencing of the eighth largest segment of rice
RT dwarf virus and its expression in E. coli.";
RL Ping Tu Hsueh Pao 11:56-62(1995).
RN [2]
RP PARTIAL NUCLEOTIDE SEQUENCE [MRNA].
RA Gao Q., Qu Y., Liu W., Pan N.-S., Chen Z.;
RT "Partial cDNA cloning and nucleotide sequence of rice dwarf virus genome.";
RL Acta Bot. Sin. 32:13-18(1990).
RN [3]
RP PROTEOLYTIC PROCESSING, AND PARTIAL PROTEIN SEQUENCE.
RX PubMed=9787666; DOI=10.1007/s007050050421;
RA Mao Z.J., Li Y., Xu H., Zheng H.H., Schiemann J., Casper R., Chen Z.L.;
RT "The 42K protein of rice dwarf virus is a post-translational cleavage
RT product of the 46K outer capsid protein.";
RL Arch. Virol. 143:1831-1838(1998).
RN [4]
RP SUBCELLULAR LOCATION.
RX PubMed=16432031; DOI=10.1099/vir.0.81425-0;
RA Wei T., Shimizu T., Hagiwara K., Kikuchi A., Moriyasu Y., Suzuki N.,
RA Chen H., Omura T.;
RT "Pns12 protein of Rice dwarf virus is essential for formation of viroplasms
RT and nucleation of viral-assembly complexes.";
RL J. Gen. Virol. 87:429-438(2006).
RN [5]
RP INTERACTION WITH ORYZA SATIVA GLO1/GOX, AND SUBCELLULAR LOCATION.
RC STRAIN=cv. Xiushui 11;
RX PubMed=17174956; DOI=10.1016/j.febslet.2006.11.073;
RA Zhou F., Wu G., Deng W., Pu Y., Wei C., Li Y.;
RT "Interaction of rice dwarf virus outer capsid P8 protein with rice
RT glycolate oxidase mediates relocalization of P8.";
RL FEBS Lett. 581:34-40(2007).
CC -!- FUNCTION: Capsid protein which self-assembles to form the outer
CC icosahedral capsid with a T=13 symmetry, about 70 nm in diameter and
CC consisting of 780 molecules capsid proteins.
CC -!- SUBUNIT: Homotrimer (By similarity). Homomultimer (By similarity).
CC Interacts with host peroxisomal glycolate oxidase (GOX). This
CC interaction mediates its relocation to virus factories peripheral to
CC host peroxisomes. {ECO:0000250, ECO:0000269|PubMed:17174956}.
CC -!- SUBCELLULAR LOCATION: [Outer capsid protein P8]: Virion {ECO:0000305}.
CC Host cytoplasm {ECO:0000269|PubMed:16432031,
CC ECO:0000269|PubMed:17174956}. Note=Found in the peripheral regions of
CC spherical cytoplasmic structures, called virus factories, that appear
CC early after infection and are the site of viral replication and
CC packaging.
CC -!- SIMILARITY: Belongs to the phytoreovirus outer capsid protein P8
CC family. {ECO:0000305}.
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DR EMBL; U36565; AAA88764.1; -; mRNA.
DR RefSeq; NP_620534.1; NC_003764.1.
DR SMR; Q85439; -.
DR GeneID; 956499; -.
DR KEGG; vg:956499; -.
DR Proteomes; UP000002239; Genome.
DR GO; GO:0030430; C:host cell cytoplasm; IDA:UniProtKB.
DR GO; GO:0044161; C:host cell cytoplasmic vesicle; IDA:UniProtKB.
DR GO; GO:0019031; C:viral envelope; IEA:InterPro.
DR GO; GO:0039624; C:viral outer capsid; IEA:UniProtKB-KW.
DR GO; GO:0046789; F:host cell surface receptor binding; IEA:InterPro.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0019064; P:fusion of virus membrane with host plasma membrane; IEA:InterPro.
DR GO; GO:0019048; P:modulation by virus of host process; IPI:UniProtKB.
DR InterPro; IPR008980; Capsid_hemagglutn.
DR InterPro; IPR009807; Phytoreo_P8.
DR InterPro; IPR008935; Virus_capsid_a-hlx_vir.
DR Pfam; PF07124; Phytoreo_P8; 1.
DR SUPFAM; SSF48345; SSF48345; 1.
DR SUPFAM; SSF49818; SSF49818; 1.
PE 1: Evidence at protein level;
KW Capsid protein; Direct protein sequencing; Host cytoplasm;
KW Host-virus interaction; Outer capsid protein; Reference proteome; Virion.
FT CHAIN 1..421
FT /note="Outer capsid protein P8"
FT /id="PRO_0000040671"
FT CHAIN 1..362
FT /note="Outer capsid protein P8'"
FT /id="PRO_0000040672"
FT CHAIN 363..421
FT /note="Small peptide 1"
FT /id="PRO_0000040673"
SQ SEQUENCE 421 AA; 46424 MW; E1B6E34C52FEE235 CRC64;
MSRQMWLDTS ALLEAISEYV VRCNGDTFSG LTTGDFNALS NMFTQLSVSS AGYVSDPRVP
LQTMSNMFVS FITSTDRCGY MLGKTWFNSD TKPTVSDDFI TAYIKPRLQV PMSDTVRQLN
NLSLQPSAKP KLYERQNAIM KGLDIPYSEP IEPCKLFRSV AGQTGNIPLM GILLTPPVAQ
QQPFFVAERR RILFGIRSNA AIPAGAYQFV VPAWASVLSV TGAYVYFTNS FFGTTIAGVT
ATATAADAAT TFTVPTDANN LPVQTDSRLS FSLGGGNINL ELGVAKTGFC VAIEGEFTIL
ANRSQAYYTL NSITQTPTSI DDFDVSDFLT TFLSQLRACG QYEIFSDAMD QLTNNLITNY
MDPPAIPAGL AFTSPWFRFS ERARTILALQ NVDLNIRKLM VRHLWVITSL IAVFGRYYRP
N