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P8_RDVS
ID   P8_RDVS                 Reviewed;         421 AA.
AC   Q85451;
DT   01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1996, sequence version 1.
DT   02-DEC-2020, entry version 74.
DE   RecName: Full=Outer capsid protein P8;
DE   AltName: Full=Structural protein P8;
DE   Contains:
DE     RecName: Full=Outer capsid protein P8';
DE   Contains:
DE     RecName: Full=Small peptide 1;
DE              Short=Sp1;
GN   Name=S8;
OS   Rice dwarf virus (isolate S) (RDV).
OC   Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes;
OC   Reovirales; Reoviridae; Sedoreovirinae; Phytoreovirus.
OX   NCBI_TaxID=142806;
OH   NCBI_TaxID=114194; Alopecurus aequalis.
OH   NCBI_TaxID=90397; Echinochloa crus-galli (Barnyard grass) (Panicum crus-galli).
OH   NCBI_TaxID=94400; Nephotettix cincticeps (Green rice leafhopper) (Selenocephalus cincticeps).
OH   NCBI_TaxID=4530; Oryza sativa (Rice).
OH   NCBI_TaxID=147271; Paspalum.
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RA   Omura T., Takahashi Y., Tomiyama M., Kimura I., Hibino H.;
RT   "Nucleotide sequence of the outer capsid protein gene of a severe strain of
RT   rice dwarf virus.";
RL   Nihon Shokubutsu Byori Gakkaiho 59:438-440(1993).
CC   -!- FUNCTION: Capsid protein which self-assembles to form the outer
CC       icosahedral capsid with a T=13 symmetry, about 70 nm in diameter and
CC       consisting of 780 molecules capsid proteins.
CC   -!- SUBUNIT: Homotrimer (By similarity). Homomultimer (By similarity).
CC       Interacts with host peroxisomal glycolate oxidase (GOX). This
CC       interaction mediates its relocation to virus factories peripheral to
CC       host peroxisomes (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Outer capsid protein P8]: Virion {ECO:0000305}.
CC       Host cytoplasm {ECO:0000250}. Note=Found in the peripheral regions of
CC       spherical cytoplasmic structures, called virus factories, that appear
CC       early after infection and are the site of viral replication and
CC       packaging. {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the phytoreovirus outer capsid protein P8
CC       family. {ECO:0000305}.
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DR   EMBL; D13773; BAA02916.1; -; Genomic_RNA.
DR   SMR; Q85451; -.
DR   GO; GO:0030430; C:host cell cytoplasm; ISS:UniProtKB.
DR   GO; GO:0044161; C:host cell cytoplasmic vesicle; ISS:UniProtKB.
DR   GO; GO:0019031; C:viral envelope; IEA:InterPro.
DR   GO; GO:0039624; C:viral outer capsid; IEA:UniProtKB-KW.
DR   GO; GO:0046789; F:host cell surface receptor binding; IEA:InterPro.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   GO; GO:0019064; P:fusion of virus membrane with host plasma membrane; IEA:InterPro.
DR   GO; GO:0019048; P:modulation by virus of host process; ISS:UniProtKB.
DR   InterPro; IPR008980; Capsid_hemagglutn.
DR   InterPro; IPR009807; Phytoreo_P8.
DR   InterPro; IPR008935; Virus_capsid_a-hlx_vir.
DR   Pfam; PF07124; Phytoreo_P8; 1.
DR   SUPFAM; SSF48345; SSF48345; 1.
DR   SUPFAM; SSF49818; SSF49818; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Host cytoplasm; Host-virus interaction;
KW   Outer capsid protein; Virion.
FT   CHAIN           1..421
FT                   /note="Outer capsid protein P8"
FT                   /id="PRO_0000040677"
FT   CHAIN           1..362
FT                   /note="Outer capsid protein P8'"
FT                   /id="PRO_0000040678"
FT   CHAIN           363..421
FT                   /note="Small peptide 1"
FT                   /id="PRO_0000040679"
SQ   SEQUENCE   421 AA;  46484 MW;  99B62016EBA5D8D0 CRC64;
     MSRQMWLDTS ALLEAISEYV VRCNGDTFSG LTTGDFNALS NMFTQLSVSS AGYVSDPRVP
     LQTMSNMFVS FITSTDRCGY MLRKTWFNSD TKPTVSDDFI TTYIRPRLQV PMSDTVRQLN
     NLSLQPSAKP KLYERQNAIM KGLDIPYSEP IEPCKLFRSV AGQTGNIPMM GILATPPAAQ
     QQPFFVAERR RILFGIRSNA AIPAGAYQFV VPAWASVLSV TGAYVYFTNS FFGTTIAGVT
     ATATAADAAT TFTVPTDANN LPVQTDSRLS FSLGGGNINL ELGVAKTGFC VAIEGEFTIL
     ANRSQAYYTL NSITQTPTSI DDFDVSDFLT TFLSQLRACG QYEIFSDAMD QLTNSLITNY
     MDPPAIPAGL AFTSPWFRFS ERARTILALQ NVDLNIRKLI VRHLWVITSL IAVFGRYYRP
     N
 
 
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