PA2HB_ATRNM
ID PA2HB_ATRNM Reviewed; 121 AA.
AC P82950;
DT 05-DEC-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 90.
DE RecName: Full=Basic phospholipase A2 homolog;
DE Short=svPLA2 homolog;
DE AltName: Full=Myotoxin II;
OS Atropoides nummifer (Jumping pit viper) (Porthidium nummifer).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera;
OC Serpentes; Colubroidea; Viperidae; Crotalinae; Atropoides.
OX NCBI_TaxID=44730;
RN [1]
RP PROTEIN SEQUENCE, FUNCTION, AND SUBUNIT.
RC TISSUE=Venom;
RX PubMed=12127577; DOI=10.1016/s1357-2725(02)00060-2;
RA Angulo Y., Olamendi-Portugal T., Alape-Giron A., Possani L.D., Lomonte B.;
RT "Structural characterization and phylogenetic relationships of myotoxin II
RT from Atropoides (Bothrops) nummifer snake venom, a Lys49 phospholipase A(2)
RT homologue.";
RL Int. J. Biochem. Cell Biol. 34:1268-1278(2002).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (2.08 ANGSTROMS), AND DISULFIDE BONDS.
RX PubMed=16682766; DOI=10.1107/s1744309106010700;
RA Murakami M.T., Melo C.C., Angulo Y., Lomonte B., Arni R.K.;
RT "Structure of myotoxin II, a catalytically inactive Lys49 phospholipase A2
RT homologue from Atropoides nummifer venom.";
RL Acta Crystallogr. F 62:423-426(2006).
CC -!- FUNCTION: Snake venom phospholipase A2 homolog that lacks enzymatic
CC activity, but has myotoxic and cytolytic activities.
CC {ECO:0000269|PubMed:12127577}.
CC -!- SUBUNIT: Homodimer. {ECO:0000269|PubMed:12127577}.
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- TISSUE SPECIFICITY: Expressed by the venom gland.
CC -!- SIMILARITY: Belongs to the phospholipase A2 family. Group II subfamily.
CC K49 sub-subfamily. {ECO:0000305}.
CC -!- CAUTION: Does not bind calcium as one of the calcium-binding sites is
CC lost (Asp->Lys in position 48, which corresponds to 'Lys-49' in the
CC current nomenclature). {ECO:0000305}.
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DR PDB; 2AOZ; X-ray; 2.08 A; A=1-121.
DR PDBsum; 2AOZ; -.
DR AlphaFoldDB; P82950; -.
DR SMR; P82950; -.
DR EvolutionaryTrace; P82950; -.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0004623; F:phospholipase A2 activity; IEA:InterPro.
DR GO; GO:0090729; F:toxin activity; IEA:UniProtKB-KW.
DR GO; GO:0050482; P:arachidonic acid secretion; IEA:InterPro.
DR GO; GO:0019835; P:cytolysis; IEA:UniProtKB-KW.
DR GO; GO:0016042; P:lipid catabolic process; IEA:InterPro.
DR GO; GO:0006644; P:phospholipid metabolic process; IEA:InterPro.
DR CDD; cd00125; PLA2c; 1.
DR Gene3D; 1.20.90.10; -; 1.
DR InterPro; IPR001211; PLipase_A2.
DR InterPro; IPR016090; PLipase_A2_dom.
DR InterPro; IPR036444; PLipase_A2_dom_sf.
DR InterPro; IPR033113; PLipase_A2_His_AS.
DR PANTHER; PTHR11716; PTHR11716; 1.
DR Pfam; PF00068; Phospholip_A2_1; 1.
DR PRINTS; PR00389; PHPHLIPASEA2.
DR SMART; SM00085; PA2c; 1.
DR SUPFAM; SSF48619; SSF48619; 1.
DR PROSITE; PS00118; PA2_HIS; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cytolysis; Direct protein sequencing; Disulfide bond;
KW Myotoxin; Secreted; Toxin.
FT CHAIN 1..121
FT /note="Basic phospholipase A2 homolog"
FT /id="PRO_0000161608"
FT DISULFID 26..115
FT /evidence="ECO:0000269|PubMed:16682766"
FT DISULFID 28..44
FT /evidence="ECO:0000269|PubMed:16682766"
FT DISULFID 43..95
FT /evidence="ECO:0000269|PubMed:16682766"
FT DISULFID 49..121
FT /evidence="ECO:0000269|PubMed:16682766"
FT DISULFID 50..88
FT /evidence="ECO:0000269|PubMed:16682766"
FT DISULFID 57..81
FT /evidence="ECO:0000269|PubMed:16682766"
FT DISULFID 75..86
FT /evidence="ECO:0000269|PubMed:16682766"
FT HELIX 2..13
FT /evidence="ECO:0007829|PDB:2AOZ"
FT HELIX 17..21
FT /evidence="ECO:0007829|PDB:2AOZ"
FT TURN 25..27
FT /evidence="ECO:0007829|PDB:2AOZ"
FT STRAND 28..31
FT /evidence="ECO:0007829|PDB:2AOZ"
FT HELIX 39..50
FT /evidence="ECO:0007829|PDB:2AOZ"
FT HELIX 51..53
FT /evidence="ECO:0007829|PDB:2AOZ"
FT TURN 59..61
FT /evidence="ECO:0007829|PDB:2AOZ"
FT STRAND 66..68
FT /evidence="ECO:0007829|PDB:2AOZ"
FT STRAND 73..75
FT /evidence="ECO:0007829|PDB:2AOZ"
FT HELIX 80..98
FT /evidence="ECO:0007829|PDB:2AOZ"
FT TURN 99..102
FT /evidence="ECO:0007829|PDB:2AOZ"
FT TURN 105..107
FT /evidence="ECO:0007829|PDB:2AOZ"
FT HELIX 112..114
FT /evidence="ECO:0007829|PDB:2AOZ"
SQ SEQUENCE 121 AA; 13712 MW; 7063B3833AF7680D CRC64;
NLYQLWKMIL QETGKNAAPS YGFYGCNCGV GSRGKPKDAT DRCCFVHKCC YKALTDCSPK
TDSYSYSWKD KTIVCGKNNP CLKQECECDK AVAICLRDNL DTYNKNYKIY PKPLCKKADD
C