PACC_SCLSC
ID PACC_SCLSC Reviewed; 625 AA.
AC Q9P413;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 74.
DE RecName: Full=pH-response transcription factor pacC/RIM101;
GN Name=pac1;
OS Sclerotinia sclerotiorum (White mold) (Whetzelinia sclerotiorum).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Helotiales; Sclerotiniaceae; Sclerotinia.
OX NCBI_TaxID=5180;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND INDUCTION.
RX PubMed=11133430; DOI=10.1128/aem.67.1.75-81.2001;
RA Rollins J.A., Dickman M.B.;
RT "pH signaling in Sclerotinia sclerotiorum: identification of a pacC/RIM1
RT homolog.";
RL Appl. Environ. Microbiol. 67:75-81(2001).
CC -!- FUNCTION: Transcription factor that mediates regulation of both
CC acid- and alkaline-expressed genes in response to ambient pH. At
CC alkaline ambient pH, activates transcription of alkaline-expressed
CC genes (including pac1 itself) and represses transcription of acid-
CC expressed genes (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
CC -!- INDUCTION: By alkaline conditions. {ECO:0000269|PubMed:11133430}.
CC -!- PTM: Activated by C-terminal proteolytic cleavage by signaling protease
CC (probably palB/RIM13) at neutral to alkaline ambient pH. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the pacC/RIM101 family. {ECO:0000305}.
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DR EMBL; AY005467; AAF93178.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9P413; -.
DR VEuPathDB; FungiDB:sscle_06g049830; -.
DR OMA; QWGNCRT; -.
DR PHI-base; PHI:314; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00096; zf-C2H2; 1.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 2.
PE 2: Evidence at transcript level;
KW Activator; Cytoplasm; DNA-binding; Metal-binding; Nucleus; Repeat;
KW Repressor; Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..625
FT /note="pH-response transcription factor pacC/RIM101"
FT /id="PRO_0000046843"
FT ZN_FING 45..70
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 81..105
FT /note="C2H2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 111..133
FT /note="C2H2-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 391..440
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 455..543
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 584..625
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 444..447
FT /note="YPX[LI] motif 1"
FT MOTIF 615..618
FT /note="YPX[LI] motif 2"
FT COMPBIAS 457..473
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 486..543
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 601..618
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 625 AA; 67866 MW; 6453CB98B7650F45 CRC64;
MSSQDQQQQQ QPAQTQTSTS SSSNNENATT ATSSIQQNVV ADDSLLCQWE KCSERCPTPE
ALFDHICEKH VGRKSTNNLN LTCGWNSCRT TTVKRDHITS HIRVHVPLKP HKCEFCGKAF
KRPQDLKKHV KTHADDSVLL RTPEQSGGSN GGYRQPGGKV IANLQHLAAN PMGYYDHNAS
MHPGSAGVYG NSHHGGHSGY YAPAHSQQSS YGGGPGYYQM SHNPDLGQHA AWDEKKRNFD
NLNDFFGAAK RRQIDAHSYQ QVNQRLMQLQ GIPIGTGGGI SDYIHSAPQL VPIDGHGGHG
HGGPMPQHQY SLPLPNLRTK SDLNSIDQFL EQMQSTVYES SNAAAAAGIH QPGAHYTHQA
LNFRQSHSPP QTHIHNIGSM APHVSTSYAS APMTATHSSH SVSSGTPALT PPSSSVSYTS
GNSPMSSSGM SPISRHSSTS NAAYPNLPAV TLGYSPHHSA TAPTSTLGTN FDSDPRRRYS
GGVLQRSAGG LNSSQYRESM ETSTVGSPTP SPKETTPRPE SIVKTEVTNN IDPALSDAGS
PSVRSVDTLE SARDRAEEAW IENIRVIEAL RRYVSDRLQN GEYVKDEEDE DVSMADTDMQ
DTQVKTEEKP VESLYPVLKT DDDDE