PALIC_PALCO
ID PALIC_PALCO Reviewed; 37 AA.
AC P84645;
DT 13-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2005, sequence version 1.
DT 25-MAY-2022, entry version 43.
DE RecName: Full=Palicourein;
OS Palicourea condensata (Cappel).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Gentianales; Rubiaceae; Rubioideae; Palicoureeae;
OC Palicourea.
OX NCBI_TaxID=272141;
RN [1] {ECO:0000305}
RP PROTEIN SEQUENCE, AND FUNCTION.
RC TISSUE=Bark {ECO:0000269|PubMed:11430013};
RX PubMed=11430013; DOI=10.1021/np000372l;
RA Bokesch H.R., Pannell L.K., Cochran P.K., Sowder R.C. II, McKee T.C.,
RA Boyd M.R.;
RT "A novel anti-HIV macrocyclic peptide from Palicourea condensata.";
RL J. Nat. Prod. 64:249-250(2001).
RN [2] {ECO:0000305}
RP STRUCTURE BY NMR.
RX PubMed=14725768; DOI=10.1016/j.str.2003.11.019;
RA Barry D.G., Daly N.L., Bokesch H.R., Gustafson K.R., Craik D.J.;
RT "Solution structure of the cyclotide palicourein: implications for the
RT development of a pharmaceutical framework.";
RL Structure 12:85-94(2004).
CC -!- FUNCTION: Probably participates in a plant defense mechanism. Inhibits
CC the cytopathic effects of the human immunodeficiency virus.
CC {ECO:0000269|PubMed:11430013, ECO:0000305}.
CC -!- DOMAIN: The presence of a 'disulfide through disulfide knot'
CC structurally defines this protein as a knottin.
CC {ECO:0000269|PubMed:14725768}.
CC -!- PTM: This is a cyclic peptide. {ECO:0000269|PubMed:11430013,
CC ECO:0000269|PubMed:14725768}.
CC -!- SIMILARITY: Belongs to the cyclotide family. {ECO:0000255}.
CC -!- CAUTION: This peptide is cyclic. The start position was chosen by
CC similarity to OAK1 (kalata-B1) for which the DNA sequence is known.
CC {ECO:0000305}.
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DR PDB; 1R1F; NMR; -; A=4-37.
DR PDBsum; 1R1F; -.
DR AlphaFoldDB; P84645; -.
DR SMR; P84645; -.
DR EvolutionaryTrace; P84645; -.
DR GO; GO:0006952; P:defense response; IDA:UniProtKB.
DR InterPro; IPR005535; Cyclotide.
DR InterPro; IPR036146; Cyclotide_sf.
DR Pfam; PF03784; Cyclotide; 1.
DR SUPFAM; SSF57038; SSF57038; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Disulfide bond; Knottin;
KW Plant defense.
FT PEPTIDE 1..37
FT /note="Palicourein"
FT /evidence="ECO:0000269|PubMed:11430013"
FT /id="PRO_0000044701"
FT DISULFID 6..24
FT /evidence="ECO:0000269|PubMed:14725768"
FT DISULFID 10..26
FT /evidence="ECO:0000269|PubMed:14725768"
FT DISULFID 16..34
FT /evidence="ECO:0000269|PubMed:14725768"
FT CROSSLNK 1..37
FT /note="Cyclopeptide (Gly-Asn)"
FT /evidence="ECO:0000269|PubMed:11430013,
FT ECO:0000269|PubMed:14725768"
FT STRAND 11..13
FT /evidence="ECO:0007829|PDB:1R1F"
FT HELIX 19..22
FT /evidence="ECO:0007829|PDB:1R1F"
FT STRAND 29..31
FT /evidence="ECO:0007829|PDB:1R1F"
SQ SEQUENCE 37 AA; 3928 MW; F2E47EA83BDA960D CRC64;
GDPTFCGETC RVIPVCTYSA ALGCTCDDRS DGLCKRN