PAP10_ARATH
ID PAP10_ARATH Reviewed; 284 AA.
AC Q8W4F1; Q8LDY4;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 25-MAY-2022, entry version 96.
DE RecName: Full=Probable plastid-lipid-associated protein 10, chloroplastic;
DE AltName: Full=Fibrillin-8;
DE Flags: Precursor;
GN Name=PAP10; Synonyms=FBN8, FIB8; OrderedLocusNames=At2g46910;
GN ORFNames=F14M4.26;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP ANALYSIS].
RC STRAIN=cv. Columbia;
RX PubMed=16461379; DOI=10.1104/pp.105.076083;
RA Ytterberg A.J., Peltier J.-B., van Wijk K.J.;
RT "Protein profiling of plastoglobules in chloroplasts and chromoplasts. A
RT surprising site for differential accumulation of metabolic enzymes.";
RL Plant Physiol. 140:984-997(2006).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=21571574; DOI=10.1016/j.tplants.2011.03.014;
RA Singh D.K., McNellis T.W.;
RT "Fibrillin protein function: the tip of the iceberg?";
RL Trends Plant Sci. 16:432-441(2011).
RN [7]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND SUBCELLULAR LOCATION [LARGE SCALE
RP ANALYSIS].
RC STRAIN=cv. Columbia;
RX PubMed=22274653; DOI=10.1104/pp.111.193144;
RA Lundquist P.K., Poliakov A., Bhuiyan N.H., Zybailov B., Sun Q.,
RA van Wijk K.J.;
RT "The functional network of the Arabidopsis plastoglobule proteome based on
RT quantitative proteomics and genome-wide coexpression analysis.";
RL Plant Physiol. 158:1172-1192(2012).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast, plastoglobule
CC {ECO:0000269|PubMed:16461379, ECO:0000269|PubMed:22274653}.
CC -!- SIMILARITY: Belongs to the PAP/fibrillin family. {ECO:0000305}.
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DR EMBL; AC004411; AAC34229.2; -; Genomic_DNA.
DR EMBL; CP002685; AEC10770.1; -; Genomic_DNA.
DR EMBL; AY062597; AAL32675.1; -; mRNA.
DR EMBL; AY093345; AAM13344.1; -; mRNA.
DR EMBL; AY085727; AAM62945.1; -; mRNA.
DR RefSeq; NP_566091.1; NM_130259.2.
DR AlphaFoldDB; Q8W4F1; -.
DR SMR; Q8W4F1; -.
DR STRING; 3702.AT2G46910.1; -.
DR PaxDb; Q8W4F1; -.
DR PRIDE; Q8W4F1; -.
DR ProteomicsDB; 236659; -.
DR EnsemblPlants; AT2G46910.1; AT2G46910.1; AT2G46910.
DR GeneID; 819304; -.
DR Gramene; AT2G46910.1; AT2G46910.1; AT2G46910.
DR KEGG; ath:AT2G46910; -.
DR Araport; AT2G46910; -.
DR TAIR; locus:2041454; AT2G46910.
DR eggNOG; ENOG502QRYX; Eukaryota.
DR HOGENOM; CLU_052102_0_1_1; -.
DR OMA; FQKFECQ; -.
DR OrthoDB; 1491850at2759; -.
DR PhylomeDB; Q8W4F1; -.
DR PRO; PR:Q8W4F1; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q8W4F1; baseline and differential.
DR Genevisible; Q8W4F1; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0010287; C:plastoglobule; HDA:TAIR.
DR InterPro; IPR039633; PAP.
DR InterPro; IPR006843; PAP/fibrillin_dom.
DR PANTHER; PTHR31906; PTHR31906; 1.
DR Pfam; PF04755; PAP_fibrillin; 1.
PE 1: Evidence at protein level;
KW Chloroplast; Plastid; Reference proteome; Transit peptide.
FT TRANSIT 1..40
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 41..284
FT /note="Probable plastid-lipid-associated protein 10,
FT chloroplastic"
FT /id="PRO_0000286535"
FT CONFLICT 3
FT /note="R -> L (in Ref. 4; AAM62945)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 284 AA; 31580 MW; 7822EE32645E115C CRC64;
MDRIASATFS CPAISLSRVC RISPFGLNIK TNHRKRFSCR VAVASGETSA RVVVDNELDL
EHKKHDLLRA VQDTQRGLTA TSDQRSIIEE ALVTVEGFNG GEEIDPVKLD GTWRLQYTSA
PDVVVLFEAA SRLPFFQVGQ VFQKFECRDR SDGGIIRNVV QWSLPSLLEE QEGATLVVTA
KFDKVSSRNI YLQFEEISVR NININEQLQA LIAPAILPRS FLSLQLLQFI RTFKAQIPVN
ATSPGRRSVG GLYYLSYLDN NMLLGRSVGG GGVFVFTKSQ PLEL
