PAP3_ORYSJ
ID PAP3_ORYSJ Reviewed; 374 AA.
AC Q7XBW5; A0A0P0XXK0; Q0IVE6; Q8W3I2;
DT 26-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Probable plastid-lipid-associated protein 3, chloroplastic;
DE Flags: Precursor;
GN Name=PAP3; OrderedLocusNames=Os10g0575700, LOC_Os10g42500;
GN ORFNames=OSJNBa0027L23.3;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12791992; DOI=10.1126/science.1083523;
RA Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S.,
RA Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D.,
RA Oates R., Palmer M., Pries G., Gibson J., Anderson H., Paradkar M.,
RA Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F.,
RA Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M.,
RA Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R.,
RA Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F.,
RA Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D.,
RA Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R.,
RA Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S.,
RA Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S.,
RA Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R.,
RA Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M.,
RA Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R.,
RA Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E.,
RA Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.;
RT "In-depth view of structure, activity, and evolution of rice chromosome
RT 10.";
RL Science 300:1566-1569(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the PAP/fibrillin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF27319.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC018929; AAL67595.1; -; Genomic_DNA.
DR EMBL; DP000086; AAP55143.1; -; Genomic_DNA.
DR EMBL; AP008216; BAF27319.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014966; BAT12198.1; -; Genomic_DNA.
DR RefSeq; XP_015614073.1; XM_015758587.1.
DR AlphaFoldDB; Q7XBW5; -.
DR STRING; 4530.OS10T0575700-00; -.
DR PaxDb; Q7XBW5; -.
DR PRIDE; Q7XBW5; -.
DR EnsemblPlants; Os10t0575700-00; Os10t0575700-00; Os10g0575700.
DR GeneID; 4349489; -.
DR Gramene; Os10t0575700-00; Os10t0575700-00; Os10g0575700.
DR KEGG; osa:4349489; -.
DR eggNOG; ENOG502QQMX; Eukaryota.
DR HOGENOM; CLU_045041_0_2_1; -.
DR InParanoid; Q7XBW5; -.
DR OMA; PDEWGDR; -.
DR OrthoDB; 1037321at2759; -.
DR Proteomes; UP000000763; Chromosome 10.
DR Proteomes; UP000059680; Chromosome 10.
DR Genevisible; Q7XBW5; OS.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR InterPro; IPR039633; PAP.
DR InterPro; IPR006843; PAP/fibrillin_dom.
DR PANTHER; PTHR31906; PTHR31906; 1.
DR Pfam; PF04755; PAP_fibrillin; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Reference proteome; Transit peptide.
FT TRANSIT 1..46
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 47..374
FT /note="Probable plastid-lipid-associated protein 3,
FT chloroplastic"
FT /id="PRO_0000023212"
FT REGION 19..148
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..33
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 374 AA; 40041 MW; B46CE59EED8BC600 CRC64;
MAMPPPLFAA ASHASLLLPS PTIHSSTGSR RPFRLPLRSS RRPPVAAAAA SGVPDEWGDR
SPSAPEPPSQ PDPPIDDDEW GRDDPSASGN SRPVLVTDEW GEPGVPEPQS TSAADPPTND
DEWGGDPAPP PPPPPVPEED NEEERREELK RCLVDTVYGS DLGFRASSEV RGEVLELVTQ
LEATNPTPEP VQATHLLAGN WILIYTAYSE LLPILAVGAA PLFKVDEISQ EIDTNSMTIV
NASTISSPFA SFSFSATASF DVQSPSRIEV QFKEGSFQPP KISSSVDLPA EVDIFGQKIS
LGPVQQVLNP LQQAFASIAG SISGQPPLKL PIPGNNRARS WLLTTYLDKD LRISRGDGGL
FILVKEGSPL LDQL