PAP5_ARATH
ID PAP5_ARATH Reviewed; 234 AA.
AC Q6DBN2; Q9LU84;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Probable plastid-lipid-associated protein 5, chloroplastic;
DE AltName: Full=Fibrillin-3b;
DE Flags: Precursor;
GN Name=PAP5; Synonyms=FBN3b, FIB3b; OrderedLocusNames=At3g26080;
GN ORFNames=MPE11.25;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=21571574; DOI=10.1016/j.tplants.2011.03.014;
RA Singh D.K., McNellis T.W.;
RT "Fibrillin protein function: the tip of the iceberg?";
RL Trends Plant Sci. 16:432-441(2011).
RN [5]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RC STRAIN=cv. Columbia;
RX PubMed=22274653; DOI=10.1104/pp.111.193144;
RA Lundquist P.K., Poliakov A., Bhuiyan N.H., Zybailov B., Sun Q.,
RA van Wijk K.J.;
RT "The functional network of the Arabidopsis plastoglobule proteome based on
RT quantitative proteomics and genome-wide coexpression analysis.";
RL Plant Physiol. 158:1172-1192(2012).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid
CC {ECO:0000269|PubMed:22274653}. Note=Located in thylakoid as a
CC peripheral protein at the stromal side. {ECO:0000269|PubMed:22274653}.
CC -!- SIMILARITY: Belongs to the PAP/fibrillin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB01071.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB023041; BAB01071.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE77112.1; -; Genomic_DNA.
DR EMBL; BT014990; AAT70441.1; -; mRNA.
DR EMBL; BT020596; AAW80869.1; -; mRNA.
DR RefSeq; NP_189237.2; NM_113512.4.
DR AlphaFoldDB; Q6DBN2; -.
DR SMR; Q6DBN2; -.
DR STRING; 3702.AT3G26080.1; -.
DR PaxDb; Q6DBN2; -.
DR PRIDE; Q6DBN2; -.
DR EnsemblPlants; AT3G26080.1; AT3G26080.1; AT3G26080.
DR GeneID; 822205; -.
DR Gramene; AT3G26080.1; AT3G26080.1; AT3G26080.
DR KEGG; ath:AT3G26080; -.
DR Araport; AT3G26080; -.
DR TAIR; locus:2092165; AT3G26080.
DR eggNOG; ENOG502QSMF; Eukaryota.
DR HOGENOM; CLU_069245_0_1_1; -.
DR OMA; HFPINIR; -.
DR PhylomeDB; Q6DBN2; -.
DR PRO; PR:Q6DBN2; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q6DBN2; baseline and differential.
DR Genevisible; Q6DBN2; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; HDA:TAIR.
DR InterPro; IPR039633; PAP.
DR InterPro; IPR006843; PAP/fibrillin_dom.
DR PANTHER; PTHR31906; PTHR31906; 1.
DR Pfam; PF04755; PAP_fibrillin; 2.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Thylakoid; Transit peptide.
FT TRANSIT 1..45
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 46..234
FT /note="Probable plastid-lipid-associated protein 5,
FT chloroplastic"
FT /id="PRO_0000286534"
SQ SEQUENCE 234 AA; 26249 MW; 5AA04A65B849D72A CRC64;
MALPWCLKTG VLTSPAAGFN HPSDSGFAVP TKLLSIRKGD RERLRIQAVF SFPPRNGGAE
KRKQLKHELV EAIEPLERGA TASPDDQLLI DQLARKVEAV NPTKEPLKSD LINGKWELIY
TTSAAILQAK KPRFLRSLTN YQCINMDTLK VQRMETWPFY NSVTGDLTPL NSKTVAVKLQ
VFKILGFIPV KAPDGTARGE LEITYVDEEL RISRGKGNLL FILKMFDPTY RIPL
