PAP7_ORYSJ
ID PAP7_ORYSJ Reviewed; 278 AA.
AC Q0JD85; Q7XMG1;
DT 08-MAY-2019, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Fibrillin protein 5 homolog {ECO:0000303|PubMed:28751900};
DE Short=OsFBN5 {ECO:0000303|PubMed:28751900};
DE AltName: Full=Plastid-lipid-associated protein 7 homolog, chloroplastic {ECO:0000305};
DE Flags: Precursor;
GN Name=FBN5 {ECO:0000303|PubMed:28751900};
GN OrderedLocusNames=Os04g0422000 {ECO:0000312|EMBL:BAF14702.1},
GN LOC_Os04g34460 {ECO:0000305};
GN ORFNames=OsJ_14801 {ECO:0000312|EMBL:EAZ30739.1},
GN OSJNBa0028I23.21 {ECO:0000312|EMBL:CAE04639.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP FUNCTION, INTERACTION WITH SPS2, SUBCELLULAR LOCATION, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=28751900; DOI=10.3389/fpls.2017.01197;
RA Kim E.H., Lee D.W., Lee K.R., Jung S.J., Jeon J.S., Kim H.U.;
RT "Conserved function of Fibrillin5 in the plastoquinone-9 biosynthetic
RT pathway in Arabidopsis and rice.";
RL Front. Plant Sci. 8:1197-1197(2017).
CC -!- FUNCTION: Essential for plastoquinone-9 (PQ-9) biosynthesis through its
CC interaction with the solanesyl diphosphate synthase SPS2
CC (PubMed:28751900). Binds to the hydrophobic solanesyl moiety, which is
CC generated by SPS2, in FBN5-SPS homodimeric complexes to stimulates the
CC enzyme activity of SPS2 (Probable). {ECO:0000269|PubMed:28751900,
CC ECO:0000305|PubMed:28751900}.
CC -!- SUBUNIT: Interacts with SPS2. {ECO:0000269|PubMed:28751900}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast
CC {ECO:0000269|PubMed:28751900}.
CC -!- DISRUPTION PHENOTYPE: Reduced growth and sometimes seedling lethality
CC (PubMed:28751900). Strong reduction of levels of plastoquinone-9 (PQ-9)
CC and complete loss of plastochromanol-8 (PC-8) in leaves
CC (PubMed:28751900). Severe increase of photoinhibition at high light
CC intensity (PubMed:28751900). {ECO:0000269|PubMed:28751900}.
CC -!- SIMILARITY: Belongs to the PAP/fibrillin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAE04639.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EAZ30739.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL662944; CAE04639.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008210; BAF14702.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS89200.1; -; Genomic_DNA.
DR EMBL; CM000141; EAZ30739.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AK060398; BAG87434.1; -; mRNA.
DR EMBL; AK070660; BAG92082.1; -; mRNA.
DR RefSeq; XP_015635928.1; XM_015780442.1.
DR AlphaFoldDB; Q0JD85; -.
DR STRING; 4530.OS04T0422000-01; -.
DR PaxDb; Q0JD85; -.
DR PRIDE; Q0JD85; -.
DR EnsemblPlants; Os04t0422000-01; Os04t0422000-01; Os04g0422000.
DR EnsemblPlants; Os04t0422000-02; Os04t0422000-02; Os04g0422000.
DR GeneID; 4335835; -.
DR Gramene; Os04t0422000-01; Os04t0422000-01; Os04g0422000.
DR Gramene; Os04t0422000-02; Os04t0422000-02; Os04g0422000.
DR KEGG; osa:4335835; -.
DR eggNOG; ENOG502QRU1; Eukaryota.
DR HOGENOM; CLU_069245_1_0_1; -.
DR InParanoid; Q0JD85; -.
DR OMA; LTIRANY; -.
DR OrthoDB; 1286171at2759; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000007752; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR ExpressionAtlas; Q0JD85; baseline and differential.
DR GO; GO:0009507; C:chloroplast; IDA:UniProtKB.
DR GO; GO:0010236; P:plastoquinone biosynthetic process; IMP:UniProtKB.
DR InterPro; IPR039633; PAP.
DR InterPro; IPR006843; PAP/fibrillin_dom.
DR PANTHER; PTHR31906; PTHR31906; 1.
DR Pfam; PF04755; PAP_fibrillin; 1.
PE 1: Evidence at protein level;
KW Chloroplast; Plastid; Reference proteome; Stress response; Transit peptide.
FT TRANSIT 1..74
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 75..278
FT /note="Fibrillin protein 5 homolog"
FT /id="PRO_5013530458"
FT REGION 54..75
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 278 AA; 30617 MW; 37B95A27A6B6A0FD CRC64;
MAAASVLLLL PSPFLRPSSP AHRARCGIAT TTTTSTSGRR GLFLFASRCR PGPRRRAASA
AVPPEHGLSQ PQPQARAVGS YEAALGDAKD ALYAALEGMN RGIFGMTSEK RSEIHALVEL
LESKNPTPEP TDKLQDKVDG CWRLVYSTIS ILGKKRTKLG LRDFISLGDF FQMIDVKEEK
AVNVIKFSAR ALKILSGQLT IEASYKITTK TKVDITLDSS TITPDQLMNI FQKNYDMLLA
IFNPEGWLEI TYVDESLRIG RDDKANIFVL ERADPSEV
