PAP_VZVO
ID PAP_VZVO Reviewed; 408 AA.
AC Q4JQV9;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 02-AUG-2005, sequence version 1.
DT 23-FEB-2022, entry version 40.
DE RecName: Full=DNA polymerase processivity factor;
DE AltName: Full=DNA-binding gene 16 protein;
DE AltName: Full=Polymerase accessory protein;
DE Short=PAP;
GN ORFNames=ORF16;
OS Varicella-zoster virus (strain Oka vaccine) (HHV-3) (Human herpesvirus 3).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.
OX NCBI_TaxID=341980;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Isolate Human/Japan/P-Oka/1970, and
RC Oka varicella vaccine Biken (V-Oka-Biken);
RX PubMed=12388706; DOI=10.1128/jvi.76.22.11447-11459.2002;
RA Gomi Y., Sunamachi H., Mori Y., Nagaike K., Takahashi M., Yamanishi K.;
RT "Comparison of the complete DNA sequences of the Oka varicella vaccine and
RT its parental virus.";
RL J. Virol. 76:11447-11459(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Oka varicella vaccine VarilRix (V-Oka-GSK), and
RC Oka varicella vaccine Varivax (V-Oka-Merk);
RX PubMed=18787000; DOI=10.1128/jvi.00777-08;
RA Tillieux S.L., Halsey W.S., Thomas E.S., Voycik J.J., Sathe G.M.,
RA Vassilev V.;
RT "Complete DNA sequences of two oka strain varicella-zoster virus genomes.";
RL J. Virol. 82:11023-11044(2008).
CC -!- FUNCTION: Plays an essential role in viral DNA replication by acting as
CC the polymerase accessory subunit. Associates with the viral polymerase
CC to increase its processivity and forms high-affinity direct
CC interactions with DNA. Facilitates the origin-binding protein loading
CC onto DNA thus increasing its ability to assemble into a functional
CC complex capable of unwinding duplex DNA (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts with the DNA polymerase catalytic subunit. Interacts
CC with the origin-binding protein (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the herpesviridae DNA polymerase processivity
CC factor family. {ECO:0000305}.
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DR EMBL; AB097932; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AB097933; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; DQ008354; AAY57684.1; -; Genomic_DNA.
DR EMBL; DQ008355; AAY57755.1; -; Genomic_DNA.
DR SMR; Q4JQV9; -.
DR IntAct; Q4JQV9; 18.
DR MINT; Q4JQV9; -.
DR Proteomes; UP000002603; Genome.
DR Proteomes; UP000008504; Genome.
DR Proteomes; UP000008505; Genome.
DR Proteomes; UP000008506; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR InterPro; IPR003202; Herpes_UL42.
DR Pfam; PF02282; Herpes_UL42; 2.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; Host nucleus.
FT CHAIN 1..408
FT /note="DNA polymerase processivity factor"
FT /id="PRO_0000385148"
FT MOTIF 344..353
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000250"
SQ SEQUENCE 408 AA; 46060 MW; DD770E6079581FF9 CRC64;
MDLRSRTDDA LDMELHAGFD APEIARAVLT EKTLTGLISS ISPLVNRLRD SILIFSDEGL
IIHCSLETEQ LYIPIPANMF DQYNWTGPRM VVLAATEGRS SLIDAFRHTK DPSTPTRLYF
KFTGQPPERS IIQTMVWQRP GDCGPDDQVQ CYKQVVKREL ACYTMMFPNL TPDISICLKR
DQFTRLQRLL KTFGFTTCFI LTATDMYIQT AGGGFISFNV SLDINGSKPT PYNLIRSITN
SKRILNNVVY GSGSMREFGV LLETHSGFRS AVQNLKLTRD ETCYINFYLA LTNSPMVGLY
IQRSAPVHSF FYATFLSPKD LKEKLTSMQL FANTESVKDE PPLKKRRNLL TKRNEKNTGN
KMGGKLPETT WQEGIGIREY CVAPPVDPAG TLDYSELSRE SDVICTVK