PATL2_XENTR
ID PATL2_XENTR Reviewed; 735 AA.
AC B5DEB9;
DT 08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT 14-OCT-2008, sequence version 1.
DT 03-AUG-2022, entry version 45.
DE RecName: Full=Protein PAT1 homolog 2;
DE AltName: Full=PAT1-like protein 2;
DE AltName: Full=Protein PAT1 homolog a;
DE Short=Pat1a;
GN Name=patl2;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA-binding protein that acts as a translational repressor.
CC {ECO:0000250|UniProtKB:Q4V7K4}.
CC -!- SUBUNIT: Interacts with ribonucleoprotein complex components. Interacts
CC with cpeb (By similarity). {ECO:0000250|UniProtKB:Q4V7K4}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:Q4V7K4}. Nucleus
CC {ECO:0000250|UniProtKB:Q4V7K4}.
CC -!- SIMILARITY: Belongs to the PAT1 family. {ECO:0000305}.
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DR EMBL; BC168606; AAI68606.1; -; mRNA.
DR RefSeq; NP_001135679.1; NM_001142207.1.
DR RefSeq; XP_012812030.1; XM_012956576.2.
DR RefSeq; XP_012812031.1; XM_012956577.2.
DR AlphaFoldDB; B5DEB9; -.
DR SMR; B5DEB9; -.
DR STRING; 8364.ENSXETP00000035440; -.
DR GeneID; 100216240; -.
DR KEGG; xtr:100216240; -.
DR CTD; 197135; -.
DR Xenbase; XB-GENE-5892251; patl2.
DR InParanoid; B5DEB9; -.
DR OrthoDB; 950451at2759; -.
DR Proteomes; UP000008143; Chromosome 2.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000014167; Expressed in ovary and 8 other tissues.
DR ExpressionAtlas; B5DEB9; baseline.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0000932; C:P-body; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; ISS:UniProtKB.
DR GO; GO:0000290; P:deadenylation-dependent decapping of nuclear-transcribed mRNA; IBA:GO_Central.
DR GO; GO:0017148; P:negative regulation of translation; ISS:UniProtKB.
DR GO; GO:0033962; P:P-body assembly; IBA:GO_Central.
DR InterPro; IPR039900; Pat1-like.
DR InterPro; IPR019167; PAT1_dom.
DR PANTHER; PTHR21551; PTHR21551; 1.
DR Pfam; PF09770; PAT1; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Nucleus; Reference proteome; RNA-binding.
FT CHAIN 1..735
FT /note="Protein PAT1 homolog 2"
FT /id="PRO_0000404580"
FT REGION 39..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 336..366
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 45..93
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 340..361
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 735 AA; 83746 MW; A94C42DC26C773D3 CRC64;
MDLGSDQLLP EDYFLAEEGA LLEEMAEEDE EIDLYNEVTF GLDQESDEEP TKQEEDHKKP
VQIPEAPKIE EPEKPQPIKE TKKPEKSPLR EVKIVVESDE EHVDRSIDSG GHTMNSTMDD
SELGDPAVMR AFHGKPTLES LDSAVVDSGI GSTWSELDTD YDQSGMDSGL WEASPKVSMS
ATGQILEDKA ILRVMERAPY LPPANLEFLG SPLQRGFMPS QRLQRPEMGV MSPKPYRPRF
MRQQSPLVPR SMRPPFPFTP PRRGPPIFTP NQSPGFVSQT PFRPMSPNVS TPTRPMTPKM
VRMHFGPMSP SPSFSPFFSP MGNALQRFKV PGHVTQLHPQ HRRILSQRQR PQSSSRKQWE
SRPDPYASLM SQKEKEWVIK LQMIQLQSEN PHLDDYYYQA YYEKLERKLA EEELLGERKK
REPTKLVTPY IQKAEMYESV VHIEGSLGQV AVSTCYSPRR AIDAVSYAMP DEAIKALGYQ
RLRVLKHTEK VFLLLLEVEE LARKMSHIPE EEHAHFQHKQ NYKVQRIYDI LNMAPCHSED
ESENEFLQLL QVGKGKKLIA RLLPFLTRVQ AGKILLLVVQ HLPFLIKNDS AEESLSVLYG
PLKNIINGLS FTELIGVIQE LTRPLPESSD LPLTLAFQNQ FGISLLYCLL SHGERLLSSD
MPMEPCIGDF EKWTDTVFLV AKELSHVSKS SMVEPLFLPS NLLSLFCRYL DKQTIHKLED
KMECPAIPPY TAVPS