PBAS_RAT
ID PBAS_RAT Reviewed; 177 AA.
AC P15399; Q53Z30;
DT 01-APR-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1990, sequence version 1.
DT 03-AUG-2022, entry version 147.
DE RecName: Full=Probasin;
DE Short=PB;
DE AltName: Full=M-40;
DE Flags: Precursor;
GN Name=Pbsn; Synonyms=Prbs;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), AND PROTEIN SEQUENCE OF
RP 18-40.
RX PubMed=2682630; DOI=10.1073/pnas.86.20.7843;
RA Spence A.M., Sheppard P.C., Davie J.R., Matuo Y., Nishi N., McKeehan W.L.,
RA Dodd J.G., Matusik R.J.;
RT "Regulation of a bifunctional mRNA results in synthesis of secreted and
RT nuclear probasin.";
RL Proc. Natl. Acad. Sci. U.S.A. 86:7843-7847(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 1).
RX PubMed=11058766; DOI=10.1016/s0167-4838(00)00170-9;
RA Kasper S., Matusik R.J.;
RT "Rat probasin: structure and function of an outlier lipocalin.";
RL Biochim. Biophys. Acta 1482:249-258(2000).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC TISSUE=Prostate;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Nucleus. Secreted.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative initiation; Named isoforms=2;
CC Name=1; Synonyms=Secreted;
CC IsoId=P15399-1; Sequence=Displayed;
CC Name=2; Synonyms=Nuclear;
CC IsoId=P15399-2; Sequence=VSP_018809;
CC -!- TISSUE SPECIFICITY: Prostatic epithelial cells.
CC -!- INDUCTION: Androgen-regulated, increases in concentration with zinc
CC uptake.
CC -!- SIMILARITY: Belongs to the calycin superfamily. Lipocalin family.
CC {ECO:0000305}.
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DR EMBL; M27156; AAA40805.1; -; mRNA.
DR EMBL; AY370611; AAQ67415.1; -; Genomic_DNA.
DR EMBL; BC062035; AAH62035.1; -; mRNA.
DR PIR; A32602; A32602.
DR RefSeq; NP_061998.1; NM_019125.1. [P15399-1]
DR RefSeq; XP_008771461.1; XM_008773239.2. [P15399-1]
DR AlphaFoldDB; P15399; -.
DR SMR; P15399; -.
DR BioGRID; 248446; 1.
DR IntAct; P15399; 1.
DR STRING; 10116.ENSRNOP00000042730; -.
DR PaxDb; P15399; -.
DR PRIDE; P15399; -.
DR GeneID; 54193; -.
DR KEGG; rno:54193; -.
DR CTD; 54192; -.
DR RGD; 708571; Pbsn.
DR VEuPathDB; HostDB:ENSRNOG00000003713; -.
DR eggNOG; ENOG502TDZD; Eukaryota.
DR HOGENOM; CLU_094061_4_2_1; -.
DR InParanoid; P15399; -.
DR OMA; PNENIDD; -.
DR OrthoDB; 1357921at2759; -.
DR PhylomeDB; P15399; -.
DR TreeFam; TF338197; -.
DR PRO; PR:P15399; -.
DR Proteomes; UP000002494; Chromosome X.
DR Bgee; ENSRNOG00000003713; Expressed in liver.
DR Genevisible; P15399; RN.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005549; F:odorant binding; IBA:GO_Central.
DR GO; GO:0036094; F:small molecule binding; IEA:InterPro.
DR Gene3D; 2.40.128.20; -; 1.
DR InterPro; IPR012674; Calycin.
DR InterPro; IPR002345; Lipocalin.
DR InterPro; IPR022272; Lipocalin_CS.
DR InterPro; IPR000566; Lipocln_cytosolic_FA-bd_dom.
DR InterPro; IPR002448; OBP-like.
DR PANTHER; PTHR11430; PTHR11430; 1.
DR Pfam; PF00061; Lipocalin; 1.
DR PRINTS; PR01173; ODORANTBNDNG.
DR SUPFAM; SSF50814; SSF50814; 1.
DR PROSITE; PS00213; LIPOCALIN; 1.
PE 1: Evidence at protein level;
KW Alternative initiation; Direct protein sequencing; Disulfide bond; Nucleus;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..17
FT /evidence="ECO:0000269|PubMed:2682630"
FT CHAIN 18..177
FT /note="Probasin"
FT /id="PRO_0000017955"
FT DISULFID 79..170
FT /evidence="ECO:0000250"
FT VAR_SEQ 1..17
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:2682630"
FT /id="VSP_018809"
SQ SEQUENCE 177 AA; 20780 MW; 1805977EA136669A CRC64;
MRVILLLLTL DVLGVSSMMT DKNLKKKIEG NWRTVYLAAS SVEKINEGSP LRTYFRRIEC
GKRCNRINLY FYIKKGAKCQ QFKIVGRRSQ DVYYAKYEGS TAFMLKTVNE KILLFDYFNR
NRRNDVTRVA GVLAKGRQLT KDEMTEYMNF VEEMGIEDEN VQRVMDTDTC PNKIRIR