PBCR_EMENI
ID PBCR_EMENI Reviewed; 746 AA.
AC A0A1U8QL22; C8VN92; Q5BCY1;
DT 07-OCT-2020, integrated into UniProtKB/Swiss-Prot.
DT 10-MAY-2017, sequence version 1.
DT 25-MAY-2022, entry version 22.
DE RecName: Full=Transcription factor pbcR {ECO:0000303|PubMed:22506079};
DE AltName: Full=Pimaradiene biosynthesis cluster protein R {ECO:0000303|PubMed:22506079};
GN Name=pbcR {ECO:0000303|PubMed:22506079}; ORFNames=AN1599, ANIA_01599;
OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
OS M139) (Aspergillus nidulans).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Nidulantes.
OX NCBI_TaxID=227321;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139;
RX PubMed=16372000; DOI=10.1038/nature04341;
RA Galagan J.E., Calvo S.E., Cuomo C., Ma L.-J., Wortman J.R., Batzoglou S.,
RA Lee S.-I., Bastuerkmen M., Spevak C.C., Clutterbuck J., Kapitonov V.,
RA Jurka J., Scazzocchio C., Farman M.L., Butler J., Purcell S., Harris S.,
RA Braus G.H., Draht O., Busch S., D'Enfert C., Bouchier C., Goldman G.H.,
RA Bell-Pedersen D., Griffiths-Jones S., Doonan J.H., Yu J., Vienken K.,
RA Pain A., Freitag M., Selker E.U., Archer D.B., Penalva M.A., Oakley B.R.,
RA Momany M., Tanaka T., Kumagai T., Asai K., Machida M., Nierman W.C.,
RA Denning D.W., Caddick M.X., Hynes M., Paoletti M., Fischer R., Miller B.L.,
RA Dyer P.S., Sachs M.S., Osmani S.A., Birren B.W.;
RT "Sequencing of Aspergillus nidulans and comparative analysis with A.
RT fumigatus and A. oryzae.";
RL Nature 438:1105-1115(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139;
RX PubMed=19146970; DOI=10.1016/j.fgb.2008.12.003;
RA Wortman J.R., Gilsenan J.M., Joardar V., Deegan J., Clutterbuck J.,
RA Andersen M.R., Archer D., Bencina M., Braus G., Coutinho P., von Dohren H.,
RA Doonan J., Driessen A.J., Durek P., Espeso E., Fekete E., Flipphi M.,
RA Estrada C.G., Geysens S., Goldman G., de Groot P.W., Hansen K.,
RA Harris S.D., Heinekamp T., Helmstaedt K., Henrissat B., Hofmann G.,
RA Homan T., Horio T., Horiuchi H., James S., Jones M., Karaffa L.,
RA Karanyi Z., Kato M., Keller N., Kelly D.E., Kiel J.A., Kim J.M.,
RA van der Klei I.J., Klis F.M., Kovalchuk A., Krasevec N., Kubicek C.P.,
RA Liu B., Maccabe A., Meyer V., Mirabito P., Miskei M., Mos M., Mullins J.,
RA Nelson D.R., Nielsen J., Oakley B.R., Osmani S.A., Pakula T., Paszewski A.,
RA Paulsen I., Pilsyk S., Pocsi I., Punt P.J., Ram A.F., Ren Q., Robellet X.,
RA Robson G., Seiboth B., van Solingen P., Specht T., Sun J.,
RA Taheri-Talesh N., Takeshita N., Ussery D., vanKuyk P.A., Visser H.,
RA van de Vondervoort P.J., de Vries R.P., Walton J., Xiang X., Xiong Y.,
RA Zeng A.P., Brandt B.W., Cornell M.J., van den Hondel C.A., Visser J.,
RA Oliver S.G., Turner G.;
RT "The 2008 update of the Aspergillus nidulans genome annotation: a community
RT effort.";
RL Fungal Genet. Biol. 46:S2-13(2009).
RN [3]
RP FUNCTION.
RX PubMed=22506079; DOI=10.1371/journal.pone.0035450;
RA Bromann K., Toivari M., Viljanen K., Vuoristo A., Ruohonen L.,
RA Nakari-Setaelae T.;
RT "Identification and characterization of a novel diterpene gene cluster in
RT Aspergillus nidulans.";
RL PLoS ONE 7:e35450-e35450(2012).
RN [4]
RP FUNCTION.
RX PubMed=27098256; DOI=10.1007/s00253-016-7517-5;
RA Bromann K., Toivari M., Viljanen K., Ruohonen L., Nakari-Setaelae T.;
RT "Engineering Aspergillus nidulans for heterologous ent-kaurene and gamma-
RT terpinene production.";
RL Appl. Microbiol. Biotechnol. 100:6345-6359(2016).
CC -!- FUNCTION: Transcription factor; part of the gene cluster that mediates
CC the biosynthesis of the diterpene ent-pimara-8(14),15-diene (PD)
CC (PubMed:22506079, PubMed:27098256). Acts as a positive regulator for
CC the cluster gene (PubMed:22506079). Down-regulates the expression of
CC the penicillin gene cluster, two putative polyketide clusters, and one
CC putative nonribosomal peptide cluster (PubMed:22506079).
CC {ECO:0000269|PubMed:22506079, ECO:0000269|PubMed:27098256}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00227}.
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DR EMBL; AACD01000025; EAA64306.1; -; Genomic_DNA.
DR EMBL; BN001307; CBF85190.1; -; Genomic_DNA.
DR RefSeq; XP_659203.1; XM_654111.1.
DR AlphaFoldDB; A0A1U8QL22; -.
DR EnsemblFungi; CBF85190; CBF85190; ANIA_01599.
DR EnsemblFungi; EAA64306; EAA64306; AN1599.2.
DR GeneID; 2875702; -.
DR KEGG; ani:AN1599.2; -.
DR eggNOG; ENOG502QRYY; Eukaryota.
DR HOGENOM; CLU_006524_0_2_1; -.
DR OMA; CHYICSN; -.
DR OrthoDB; 644551at2759; -.
DR Proteomes; UP000000560; Chromosome VII.
DR Proteomes; UP000005890; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00067; GAL4; 1.
DR Gene3D; 4.10.240.10; -; 1.
DR InterPro; IPR001138; Zn2-C6_fun-type_DNA-bd.
DR InterPro; IPR036864; Zn2-C6_fun-type_DNA-bd_sf.
DR Pfam; PF00172; Zn_clus; 1.
DR SMART; SM00066; GAL4; 1.
DR SUPFAM; SSF57701; SSF57701; 1.
DR PROSITE; PS00463; ZN2_CY6_FUNGAL_1; 1.
DR PROSITE; PS50048; ZN2_CY6_FUNGAL_2; 1.
PE 3: Inferred from homology;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Zinc.
FT CHAIN 1..746
FT /note="Transcription factor pbcR"
FT /id="PRO_0000450846"
FT DNA_BIND 47..76
FT /note="Zn(2)-C6 fungal-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00227"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 109..131
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 746 AA; 82833 MW; 5632D1EB878C61F5 CRC64;
MYPWSSTGTS PFSHPDNEGA ESGDMSMGEE QQQPHQRRQK FNNLRACQSC RASKVRCDQP
NPGMPCLRCQ KSGKPCVDAA SQPGKRQRQP INSILEMESR IETILSSAEL QDSAGDGETA
HSTALRSPSQ LSHHIQPFQH LPMGFAIPFN GGNSGTEDLN SSIRSWLNDN ITDLDARTTE
TIFSHYLTNM VPTFPVVVFA TGTTAADVRR NNPILFLAIL DVASSGFCAL ETQRKLRKLI
VQAYVHCMLR TEQYTLGLLQ ALIVSATWYR TIEPVEPGEQ MDIYQISHTA ANMALIMRLG
ESLNAKSWGG PMFPRREMKK GPGSAFQADS LEARRVWLGC HYICSNTSMS LRAPNIMRWT
RLMDECLEVL ENSPAALLSD RLLCQHIRLQ HITEEFAMHL SAEEASAPAK SRAIQIQVTH
RAFKRQLSEW RRTVGDGWDA HCTATSDDVP EDNAQRLTPP PPIVAIEPHA ITEFMDTIDN
IFRVFTSLDM STIRALPAMY LIRIIYTFII LVKLYFAAAK LPAQDAVLQV DGLQVSRRFN
RVIQMTAGWG PLWPATKLTT VFTKMRSWFE SGGDNNCQRL QQAAAWLTGW ELKPPSQGRD
AHAMNMAEVV SDDGSIVASS SRGPASWVPS LASTDVDTLA FSHEPPLGTE FSIAPPPFRS
MSCATKSCSP QAGAAEFMHD EEVPLEGQRL GDLPNIDQMD DVGMDWSQYT NMGFDLYNLD
APFLPNPPSG FDPDAAMKDN CADRNT