PBP2_STRP2
ID PBP2_STRP2 Reviewed; 680 AA.
AC A0A0H2ZQ75;
DT 23-FEB-2022, integrated into UniProtKB/Swiss-Prot.
DT 23-FEB-2022, sequence version 2.
DT 03-AUG-2022, entry version 25.
DE RecName: Full=Penicillin-binding protein 2B;
DE Short=PBP2b {ECO:0000303|PubMed:26933838};
GN Name=penA {ECO:0000303|PubMed:17041037}; Synonyms=pbp2b;
GN OrderedLocusNames=SPD_1486;
OS Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC Streptococcus.
OX NCBI_TaxID=373153;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D39 / NCTC 7466;
RX PubMed=17041037; DOI=10.1128/jb.01148-06;
RA Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M.,
RA Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.;
RT "Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus
RT pneumoniae and comparison with that of unencapsulated laboratory strain
RT R6.";
RL J. Bacteriol. 189:38-51(2007).
RN [2]
RP DISRUPTION PHENOTYPE.
RC STRAIN=D39 / NCTC 7466;
RX PubMed=26933838; DOI=10.1111/mmi.13366;
RA Tsui H.T., Zheng J.J., Magallon A.N., Ryan J.D., Yunck R., Rued B.E.,
RA Bernhardt T.G., Winkler M.E.;
RT "Suppression of a deletion mutation in the gene encoding essential PBP2b
RT reveals a new lytic transglycosylase involved in peripheral peptidoglycan
RT synthesis in Streptococcus pneumoniae D39.";
RL Mol. Microbiol. 100:1039-1065(2016).
RN [3]
RP FUNCTION, SUBCELLULAR LOCATION, AND DISRUPTION PHENOTYPE.
RC STRAIN=D39 / NCTC 7466;
RX PubMed=28941257; DOI=10.1111/mmi.13847;
RA Zheng J.J., Perez A.J., Tsui H.T., Massidda O., Winkler M.E.;
RT "Absence of the KhpA and KhpB (JAG/EloR) RNA-binding proteins suppresses
RT the requirement for PBP2b by overproduction of FtsA in Streptococcus
RT pneumoniae D39.";
RL Mol. Microbiol. 106:793-814(2017).
CC -!- FUNCTION: A transpeptidase that forms peptide cross-links between
CC adjacent glycan strands in cell wall peptidoglycan (PG). Part of the
CC elongasome machinery that synthesizes peripheral PG.
CC {ECO:0000305|PubMed:28941257}.
CC -!- SUBUNIT: Interacts with MreC in the elongasome.
CC {ECO:0000250|UniProtKB:P0A3M6}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305|PubMed:28941257};
CC Single-pass membrane protein {ECO:0000255}. Note=Localizes to the
CC midcell division sites, colocalizes with StkP.
CC {ECO:0000269|PubMed:28941257}.
CC -!- DISRUPTION PHENOTYPE: Essential, it cannot be disrupted; however
CC suppressors of the deletion can be isolated under certain growth
CC conditions. {ECO:0000269|PubMed:26933838, ECO:0000269|PubMed:28941257}.
CC -!- SIMILARITY: Belongs to the transpeptidase family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABJ55452.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; CP000410; ABJ55452.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_001829432.1; NC_008533.2.
DR SMR; A0A0H2ZQ75; -.
DR STRING; 373153.SPD_1486; -.
DR EnsemblBacteria; ABJ55452; ABJ55452; SPD_1486.
DR GeneID; 60234391; -.
DR KEGG; spd:SPD_1486; -.
DR eggNOG; COG0768; Bacteria.
DR HOGENOM; CLU_009289_7_0_9; -.
DR OMA; TLACKTG; -.
DR BioCyc; SPNE373153:G1G6V-1602-MON; -.
DR Proteomes; UP000001452; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
DR Gene3D; 3.40.710.10; -; 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56519; SSF56519; 1.
DR SUPFAM; SSF56601; SSF56601; 1.
PE 3: Inferred from homology;
KW Cell membrane; Cell shape; Cell wall biogenesis/degradation; Membrane;
KW Peptidoglycan synthesis; Transmembrane; Transmembrane helix.
FT CHAIN 1..680
FT /note="Penicillin-binding protein 2B"
FT /id="PRO_0000454545"
FT TOPO_DOM 1..8
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 9..29
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 30..680
FT /note="Extracellular"
FT /evidence="ECO:0000305"
FT ACT_SITE 386
FT /note="Acyl-ester intermediate"
FT /evidence="ECO:0000250|UniProtKB:P0AD65"
SQ SEQUENCE 680 AA; 73873 MW; 56BF2C1AA9B54C3B CRC64;
MRKFNSHSIP IRLNLLFSIV ILLFMTIIGR LLYMQVLNKD FYEKKLASAS QTKITSSSAR
GEIYDASGKP LVENTLKQVV SFTRSNKMTA TDLKETAKKL LTYVSISSPN LTERQLADYY
LADPEIYKKI VEALPSEKRL DSDGNRLSES ELYNNAVDSV QTSQLNYTED EKKEIYLFSQ
LNAVGNFATG TIATDPLNDS QVAVIASISK EMPGISISTS WDRKVLETSL SSIVGSVSSE
KAGLPAEEAE AYLKKGYSLN DRVGTSYLEK QYEETLQGKR SVKEIHLDKY GNMESVDTIE
EGSKGNNIKL TIDLAFQDSV DALLKSYFNS ELENGGAKYS EGVYAVALNP KTGAVLSMSG
IKHDLKTGEL TPDSLGTVTN VFVPGSVVKA ATISSGWENG VLSGNQTLTD QSIVFQGSAP
INSWYTQAYG SFPITAVQAL EYSSNTYMVQ TALGLMGQTY QPNMFVGTSN LESAMEKLRS
TFGEYGLGTA TGIDLPDEST GFVPKEYSFA NYITNAFGQF DNYTPMQLAQ YVATIANNGV
RVAPRIVEGI YGNNDKGGLG DLIQQLQPTE MNKVNISDSD MSILHQGFYQ VAHGTSGLTT
GRAFSNGALV SISGKTGTAE SYVADGQQAT NTNAVAYAPS DNPQIAVAVV FPHNTNLTNG
VGPSIARDII NLYQKYHPMN