PBPB_MYCS2
ID PBPB_MYCS2 Reviewed; 648 AA.
AC A0R022;
DT 26-JUN-2013, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 96.
DE RecName: Full=Penicillin-binding protein PbpB;
DE AltName: Full=PBP3;
GN Name=pbpB; Synonyms=ftsI; OrderedLocusNames=MSMEG_4233, MSMEI_4133;
OS Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS smegmatis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycolicibacterium.
OX NCBI_TaxID=246196;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RA Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA Fraser C.M.;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT mutations or sequencing errors?";
RL Genome Biol. 8:R20.1-R20.9(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=18955433; DOI=10.1101/gr.081901.108;
RA Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT and a new MS-based protocol.";
RL Genome Res. 19:128-135(2009).
RN [4]
RP FUNCTION, AND INTERACTION WITH WAG31.
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=19496931; DOI=10.1111/j.1365-2958.2009.06750.x;
RA Mukherjee P., Sureka K., Datta P., Hossain T., Barik S., Das K.P.,
RA Kundu M., Basu J.;
RT "Novel role of Wag31 in protection of mycobacteria under oxidative
RT stress.";
RL Mol. Microbiol. 73:103-119(2009).
CC -!- SUBUNIT: Interacts with Wag31. {ECO:0000269|PubMed:19496931}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the transpeptidase family. {ECO:0000305}.
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DR EMBL; CP000480; ABK71440.1; -; Genomic_DNA.
DR EMBL; CP001663; AFP40590.1; -; Genomic_DNA.
DR RefSeq; WP_011729661.1; NZ_SIJM01000003.1.
DR RefSeq; YP_888510.1; NC_008596.1.
DR AlphaFoldDB; A0R022; -.
DR SMR; A0R022; -.
DR STRING; 246196.MSMEI_4133; -.
DR PRIDE; A0R022; -.
DR EnsemblBacteria; ABK71440; ABK71440; MSMEG_4233.
DR EnsemblBacteria; AFP40590; AFP40590; MSMEI_4133.
DR GeneID; 66735578; -.
DR KEGG; msg:MSMEI_4133; -.
DR KEGG; msm:MSMEG_4233; -.
DR PATRIC; fig|246196.19.peg.4153; -.
DR eggNOG; COG0768; Bacteria.
DR OMA; HGKEEYY; -.
DR OrthoDB; 213680at2; -.
DR Proteomes; UP000000757; Chromosome.
DR Proteomes; UP000006158; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR Gene3D; 3.40.710.10; -; 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56519; SSF56519; 1.
DR SUPFAM; SSF56601; SSF56601; 1.
PE 1: Evidence at protein level;
KW Cell membrane; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..648
FT /note="Penicillin-binding protein PbpB"
FT /id="PRO_0000422680"
FT TRANSMEM 52..72
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 355
FT /note="Acyl-ester intermediate"
FT /evidence="ECO:0000250|UniProtKB:P0AD65"
SQ SEQUENCE 648 AA; 69708 MW; 96CCC8D8BCF92BE5 CRC64;
MSRRGDRPRT PAQPRKKARV DQPRSARTRR TRVSEAEAGL RSSSFVFRHR TGNLAILAVL
VIAAVQLFML QVPRAAGLRA EAASQLKVTD ITPAIRGSII DRNNDKLAFT IEARALTFQP
TRVRKQLDEA WRKAQEAGSS TSDDVPNPDE RLNEIAKEIA ARLNNTPDAK TVLKKLKSNE
TFVYLARAVD PAIANAITDK FPEVGSERQD LRQYPGGSLA ANIVGGIDWD GHGLLGLEDS
LDAVLAGTDG SVTYDRGSDG VVIPGSYRNR HDAVDGSTVQ LTIDDDIQYH VQQQVQMAKD
ASGAKNVSAV VLDAKTGEVL AMSNDNTFDP SQDIGRQADR QMGNPSVSSP FEPGSVNKIV
TAAAAIENGL TNPDEVLQVP GSIHMGGVTV RDAWNHGVMP YTTTGVFGKS SNVGTLMLAQ
RVGPERFYEM LRKFGLGQRT NVGLPGESSG LLPPIDQWSG SSFSNLPIGQ GLSMTLLQMA
AMYQTVANDG VRVPPRIIKS TIAPDGTVTE EERPEGIRVI SPETARTLRS MFRSVVQRDP
MGVQQGTGPQ AAVEGYQIAG KTGTAQQINP ACGCYYDDVY WITFAGIAPA DDPRYVIGIM
MDAPQRAADG SPGSSAAPLF HEIASWLLQR HNVPLSPDPG PPLTLQAT