PCBP1_RABIT
ID PCBP1_RABIT Reviewed; 356 AA.
AC O19048;
DT 11-JAN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Poly(rC)-binding protein 1;
DE AltName: Full=Alpha-CP1;
DE AltName: Full=Heterogeneous nuclear ribonucleoprotein E1;
DE Short=hnRNP E1;
GN Name=PCBP1;
OS Oryctolagus cuniculus (Rabbit).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.
OX NCBI_TaxID=9986;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=10101190; DOI=10.1093/nar/27.8.1828;
RA Thiele B.J., Berger M., Huth A., Reimann I., Schwarz K., Thiele H.;
RT "Tissue-specific translational regulation of alternative rabbit 15-
RT lipoxygenase mRNAs differing in their 3'-untranslated regions.";
RL Nucleic Acids Res. 27:1828-1836(1999).
CC -!- FUNCTION: Single-stranded nucleic acid binding protein that binds
CC preferentially to oligo dC. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; AJ003023; CAA05814.1; -; mRNA.
DR RefSeq; NP_001075593.1; NM_001082124.1.
DR AlphaFoldDB; O19048; -.
DR SMR; O19048; -.
DR STRING; 9986.ENSOCUP00000020092; -.
DR PRIDE; O19048; -.
DR Ensembl; ENSOCUT00000003633; ENSOCUP00000020092; ENSOCUG00000003634.
DR GeneID; 100008848; -.
DR KEGG; ocu:100008848; -.
DR CTD; 5093; -.
DR eggNOG; KOG2190; Eukaryota.
DR GeneTree; ENSGT00940000161582; -.
DR HOGENOM; CLU_022670_0_1_1; -.
DR InParanoid; O19048; -.
DR OMA; GQDRCGD; -.
DR OrthoDB; 954970at2759; -.
DR TreeFam; TF318292; -.
DR Proteomes; UP000001811; Chromosome 2.
DR Bgee; ENSOCUG00000003634; Expressed in embryo and 15 other tissues.
DR GO; GO:0036464; C:cytoplasmic ribonucleoprotein granule; IEA:Ensembl.
DR GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR GO; GO:0016607; C:nuclear speck; IEA:Ensembl.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:Ensembl.
DR GO; GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.
DR GO; GO:0098847; F:sequence-specific single stranded DNA binding; IEA:Ensembl.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:Ensembl.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:Ensembl.
DR Gene3D; 3.30.1370.10; -; 3.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR Pfam; PF00013; KH_1; 3.
DR SMART; SM00322; KH; 3.
DR SUPFAM; SSF54791; SSF54791; 3.
DR PROSITE; PS50084; KH_TYPE_1; 3.
PE 2: Evidence at transcript level;
KW Acetylation; DNA-binding; Isopeptide bond; Nucleus; Phosphoprotein;
KW Reference proteome; Repeat; Ribonucleoprotein; RNA-binding;
KW Ubl conjugation.
FT CHAIN 1..356
FT /note="Poly(rC)-binding protein 1"
FT /id="PRO_0000050089"
FT DOMAIN 13..75
FT /note="KH 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00117"
FT DOMAIN 97..162
FT /note="KH 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00117"
FT DOMAIN 279..343
FT /note="KH 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00117"
FT MOD_RES 1
FT /note="N-acetylmethionine"
FT /evidence="ECO:0000250|UniProtKB:Q15365"
FT MOD_RES 173
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q15365"
FT MOD_RES 189
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P60335"
FT MOD_RES 190
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q15365"
FT MOD_RES 246
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q15365"
FT MOD_RES 264
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q15365"
FT MOD_RES 273
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q15365"
FT CROSSLNK 115
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:Q15365"
SQ SEQUENCE 356 AA; 37498 MW; 6D1A261276CA206D CRC64;
MDAGVTESGL NVTLTIRLLM HGKEVGSIIG KKGESVKRIR EESGARINIS EGNCPERIIT
LTGPTNAIFK AFAMIIDKLE EDINSSMTNS TAASRPPVTL RLVVPATQCG SLIGKGGCKI
KEIRESTGAQ VQVAGDMLPN STERAITIAG VPQSVTECVK QICLVMLETL SQSPQGRVMT
IPYQPMPASS PVICAGGQDR CSDAAGYPHA THDLEGPPLD AYSIQGQHTI SPLDLAKLNQ
VARQQSHFAM MHGGTGFAGI DSSSPEVKGY WASLDASTQT THELTIPNNL IGCIIGRQGA
NINEIRQMSG AQIKIANPVE GSSGRQVTIT GSAASISLAQ YLINARLSSE KGMGCS