A38_VARV
ID A38_VARV Reviewed; 277 AA.
AC P0DST6; P33853;
DT 16-OCT-2019, integrated into UniProtKB/Swiss-Prot.
DT 16-OCT-2019, sequence version 1.
DT 03-AUG-2022, entry version 11.
DE RecName: Full=Protein A38;
GN ORFNames=A38L, A41L;
OS Variola virus.
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus.
OX NCBI_TaxID=10255;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Harvey;
RX PubMed=1331292; DOI=10.1099/0022-1317-73-11-2887;
RA Aguado B., Selmes I.P., Smith G.L.;
RT "Nucleotide sequence of 21.8 kbp of variola major virus strain Harvey and
RT comparison with vaccinia virus.";
RL J. Gen. Virol. 73:2887-2902(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Bangladesh-1975;
RX PubMed=8264798; DOI=10.1038/366748a0;
RA Massung R.F., Esposito J.J., Liu L.I., Qi J., Utterback T.R., Knight J.C.,
RA Aubin L., Yuran T.E., Parsons J.M., Loparev V.N., Selivanov N.A.,
RA Cavallaro K.F., Kerlavage A.R., Mahy B.W.J., Venter J.C.;
RT "Potential virulence determinants in terminal regions of variola smallpox
RT virus genome.";
RL Nature 366:748-751(1993).
CC -!- FUNCTION: Promotes, when overexpressed, the influx of extracellular
CC Ca2+, leading to membrane permeability and host cell necrosis.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Host membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the chordopoxvirinae A38 protein family.
CC {ECO:0000305}.
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DR EMBL; L22579; AAA60893.1; -; Genomic_DNA.
DR PIR; A72169; A72169.
DR PIR; T28583; T28583.
DR RefSeq; NP_042191.1; NC_001611.1.
DR SMR; P0DST6; -.
DR GeneID; 1486522; -.
DR KEGG; vg:1486522; -.
DR Proteomes; UP000119805; Genome.
DR GO; GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005887; C:integral component of plasma membrane; IEA:InterPro.
DR GO; GO:0070053; F:thrombospondin receptor activity; IEA:InterPro.
DR GO; GO:0022409; P:positive regulation of cell-cell adhesion; IEA:InterPro.
DR GO; GO:0050729; P:positive regulation of inflammatory response; IEA:InterPro.
DR GO; GO:0050766; P:positive regulation of phagocytosis; IEA:InterPro.
DR Gene3D; 2.60.40.10; -; 1.
DR InterPro; IPR006704; CD47.
DR InterPro; IPR013147; CD47-like_TM.
DR InterPro; IPR013270; CD47_Vset.
DR InterPro; IPR013783; Ig-like_fold.
DR PANTHER; PTHR10613; PTHR10613; 1.
DR Pfam; PF04549; CD47; 1.
DR Pfam; PF08204; V-set_CD47; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Host membrane; Membrane; Transmembrane; Transmembrane helix.
FT CHAIN 1..277
FT /note="Protein A38"
FT /id="PRO_0000448165"
FT TRANSMEM 124..144
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 156..176
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 186..206
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 219..239
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 247..267
FT /note="Helical"
FT /evidence="ECO:0000255"
FT CARBOHYD 29
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 58
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
SQ SEQUENCE 277 AA; 31595 MW; 16A7AC95E215D57E CRC64;
MLRVRILLIY LCTFVVITST KTIEYTACND TIIIPCTIDN PTKYIRWKLD NHNILTYNKT
SKTIILSKWH TSAKLHSLSD NDVSLIIKYK DILPGTYTCE DNTGIKSTVK LVQRHTNWFN
DHHTMLMFIF TGITLFLLFL EIAYTSISVV FSTNLGILQV FGCIIAMIEL CGAFLFYPSM
FTLRHIIGLL MMTLPSIFLI ITKVFSFWLL CKLSCAVHLI IYYQLAGYIL TVLGLGLSLK
ECVDGTLLLS GLGTIMVSEH FSLLFLVCFP STQRDYY