PCF5A_DANRE
ID PCF5A_DANRE Reviewed; 234 AA.
AC B3DK16;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 22-JUL-2008, sequence version 1.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=Polycomb group RING finger protein 5-A {ECO:0000312|ZFIN:ZDB-GENE-080723-33};
GN Name=pcgf5a {ECO:0000312|ZFIN:ZDB-GENE-080723-33}; ORFNames=zgc:194668;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1] {ECO:0000312|EMBL:AAI63687.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of Polycomb group (PcG) multiprotein complexes; the
CC complex class is required to maintain the transcriptionally repressive
CC state of some genes. {ECO:0000250}.
CC -!- SUBUNIT: Component of a PRC1-like complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; BC163687; AAI63687.1; -; mRNA.
DR EMBL; BC163702; AAI63702.1; -; mRNA.
DR RefSeq; NP_001122184.1; NM_001128712.1.
DR RefSeq; XP_017207149.1; XM_017351660.1.
DR AlphaFoldDB; B3DK16; -.
DR SMR; B3DK16; -.
DR STRING; 7955.ENSDARP00000095486; -.
DR PaxDb; B3DK16; -.
DR Ensembl; ENSDART00000104715; ENSDARP00000095486; ENSDARG00000071007.
DR Ensembl; ENSDART00000187479; ENSDARP00000157176; ENSDARG00000113711.
DR Ensembl; ENSDART00000193365; ENSDARP00000146800; ENSDARG00000114273.
DR GeneID; 562327; -.
DR KEGG; dre:562327; -.
DR CTD; 562327; -.
DR ZFIN; ZDB-GENE-080723-33; pcgf5a.
DR eggNOG; KOG2660; Eukaryota.
DR GeneTree; ENSGT00940000155896; -.
DR HOGENOM; CLU_046427_4_1_1; -.
DR InParanoid; B3DK16; -.
DR OMA; FHRSDPQ; -.
DR OrthoDB; 1203951at2759; -.
DR PhylomeDB; B3DK16; -.
DR TreeFam; TF324206; -.
DR PRO; PR:B3DK16; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 17.
DR Bgee; ENSDARG00000071007; Expressed in muscle tissue and 17 other tissues.
DR GO; GO:0031519; C:PcG protein complex; ISS:UniProtKB.
DR GO; GO:0035102; C:PRC1 complex; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0036353; P:histone H2A-K119 monoubiquitination; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR032443; RAWUL.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR Pfam; PF16207; RAWUL; 1.
DR SMART; SM00184; RING; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; Nucleus; Reference proteome; Repressor; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..234
FT /note="Polycomb group RING finger protein 5-A"
FT /id="PRO_0000397917"
FT ZN_FING 18..57
FT /note="RING-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00175"
FT REGION 97..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 234 AA; 27030 MW; 06ADE7AB5C302003 CRC64;
MATHRKHLVR DFNRYITCSI CRGYLIKPTA VTECLHTFCK SCIVQHFEES NECPECGIQV
HETNPLEMLR LDKTLEEIIF KLVPGLREKE EHQESEFWRK HKIKSNGEDG PRAKKSRLSG
EDDDGNGGDY HRSDPQIAIC LDCLRNNGQS GESIVKGLMK KFIRCSTRVT VGTIKKFLCV
KLKLPSSYEL DVLCNGEIMG KDHTLEFIYR TRWRLQGDSA YPMVLEYRPR IDFG