PCF7_ORYSI
ID PCF7_ORYSI Reviewed; 457 AA.
AC A2WV68;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 20-MAR-2007, sequence version 1.
DT 25-MAY-2022, entry version 57.
DE RecName: Full=Transcription factor PCF7;
GN Name=PCF7; ORFNames=OsI_003711;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2]
RP FUNCTION.
RX PubMed=12000681; DOI=10.1046/j.1365-313x.2002.01294.x;
RA Kosugi S., Ohashi Y.;
RT "DNA binding and dimerization specificity and potential targets for the TCP
RT protein family.";
RL Plant J. 30:337-348(2002).
CC -!- FUNCTION: Transcription activator. Binds the promoter core sequence 5'-
CC GGNCC-3'. {ECO:0000269|PubMed:12000681}.
CC -!- SUBUNIT: Forms homodimers and heterodimers. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
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DR EMBL; CM000126; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; A2WV68; -.
DR SMR; A2WV68; -.
DR STRING; 39946.A2WV68; -.
DR Proteomes; UP000007015; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR InterPro; IPR017887; TF_TCP_subgr.
DR InterPro; IPR005333; Transcription_factor_TCP.
DR PANTHER; PTHR31072; PTHR31072; 1.
DR Pfam; PF03634; TCP; 1.
DR PROSITE; PS51369; TCP; 1.
PE 4: Predicted;
KW Activator; Coiled coil; Developmental protein; DNA-binding; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..457
FT /note="Transcription factor PCF7"
FT /id="PRO_0000330812"
FT DOMAIN 140..198
FT /note="TCP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00701"
FT REGION 95..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 199..231
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 263..299
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 58..84
FT /evidence="ECO:0000255"
FT COMPBIAS 214..231
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 457 AA; 48318 MW; 3BB7F8CF375D7A37 CRC64;
MSGFTNKDGR QNLAPCFNFR SSPFRLTVGE RELKLEEDKN QLSKGLDPWT SNPTASASTL
HYLLQEKERA QQAHEQLQIY QQQQGFGSFL QHRIRQPASR GPGGGGGGGD GGGSSGESTP
VDALATAFGA GRIVRSAAGR KDRHSKVCTA RGLRDRRVRL AAHTAIRFYD VQDRLGYDRP
SKAVDWLMRN AKAAIDELPD RAEAPPPPAA ASTEQPEGTE QANSTSYGFG NTTGGTMTSA
ASAAAGSFLP HSLGADRVSD SVKSLFPSSS TASGAASAGH DEYRGSPPDL LSRTTSNQQP
QELCLTLQSN QHQIFSHVSS NHHGMISSAG VPGWPDHSQR MQAWHAPENS TGDGRGGGNG
DGYMFAMPSR QGLDQSQLFS HGEPLQSSGR GWASARAWLD PLAVAAIHHQ PSTMAAGQVG
FGHLVGGAGG GGGFMGFLAP AAQRLEGEEE HGSEVIR