ID   PCF7_ORYSJ              Reviewed;         457 AA.
AC   Q8LT05; A2ZXY3; B9EZQ6; Q5JML1;
DT   29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT   29-APR-2008, sequence version 2.
DT   03-AUG-2022, entry version 86.
DE   RecName: Full=Transcription factor PCF7;
GN   Name=PCF7; OrderedLocusNames=Os01g0755500, LOC_Os01g55100;
GN   ORFNames=OsJ_03497, P0503C12.34;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12447438; DOI=10.1038/nature01184;
RA   Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA   Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA   Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA   Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA   Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA   Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA   Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA   Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA   Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA   Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA   Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA   Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA   Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT   "The genome sequence and structure of rice chromosome 1.";
RL   Nature 420:312-316(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 15-457, AND FUNCTION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12000681; DOI=10.1046/j.1365-313x.2002.01294.x;
RA   Kosugi S., Ohashi Y.;
RT   "DNA binding and dimerization specificity and potential targets for the TCP
RT   protein family.";
RL   Plant J. 30:337-348(2002).
CC   -!- FUNCTION: Transcription activator. Binds the promoter core sequence 5'-
CC       GGNCC-3'. {ECO:0000269|PubMed:12000681}.
CC   -!- SUBUNIT: Forms homodimers and heterodimers. {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAD87296.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=BAF06198.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=EEE55400.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AP003268; BAD87296.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP008207; BAF06198.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP014957; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CM000138; EEE55400.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AB071807; BAB92954.1; -; mRNA.
DR   AlphaFoldDB; Q8LT05; -.
DR   SMR; Q8LT05; -.
DR   STRING; 4530.OS01T0755500-01; -.
DR   PaxDb; Q8LT05; -.
DR   PRIDE; Q8LT05; -.
DR   eggNOG; ENOG502QRP9; Eukaryota.
DR   HOGENOM; CLU_048198_0_0_1; -.
DR   InParanoid; Q8LT05; -.
DR   Proteomes; UP000000763; Chromosome 1.
DR   Proteomes; UP000007752; Chromosome 1.
DR   Proteomes; UP000059680; Chromosome 1.
DR   Genevisible; Q8LT05; OS.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:2000032; P:regulation of secondary shoot formation; IBA:GO_Central.
DR   InterPro; IPR017887; TF_TCP_subgr.
DR   InterPro; IPR005333; Transcription_factor_TCP.
DR   PANTHER; PTHR31072; PTHR31072; 1.
DR   Pfam; PF03634; TCP; 1.
DR   PROSITE; PS51369; TCP; 1.
PE   2: Evidence at transcript level;
KW   Activator; Coiled coil; Developmental protein; DNA-binding; Nucleus;
KW   Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..457
FT                   /note="Transcription factor PCF7"
FT                   /id="PRO_0000330811"
FT   DOMAIN          140..198
FT                   /note="TCP"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00701"
FT   REGION          95..119
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          199..231
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          263..299
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          58..84
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        214..231
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   457 AA;  48323 MW;  A5C5E51D89F56F88 CRC64;
     MSGFTNKDGR QNLASCFNFR SSPFRLTVGE RELKLEEDKN QLSKGLDPWT SNPTASASTL
     HYLLQEKERA QQAHEQLQIY QQQQGFGSFL QHRIRQPASR GPGGGGGGGD GGGSSGESTP
     VEALATAFGA GRIVRSAAGR KDRHSKVCTA RGLRDRRVRL AAHTAIRFYD VQDRLGYDRP
     SKAVDWLMRN AKAAIDELPD RAEAPPPPAA ASTEQPEATE QATSTSYGFG NTTGGTMTSA
     ASAAAGSFLP HSLGADRVSD SVKSLFPSSS TASGAASAGH DEYRGSPPDL LSRTTSNQQP
     QELCLTLQSN QHQIFSHVSS NHHGMISSAG VPGWPDHSQR MQAWHAPENS TGDGRGGGNG
     DGYMFAMPSR QGLDQSQLFS HGEPLQSSGR GWASARAWLD PLAVAAIHHQ PSTMAAGQVG
     FGHLVGGAGG GGGFMGFLAP AAQRLEGEEE HGSEVIR