PCID2_CAEBR
ID PCID2_CAEBR Reviewed; 413 AA.
AC Q60YJ7; A8XS59;
DT 10-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 65.
DE RecName: Full=PCI domain-containing protein 2 homolog;
DE AltName: Full=CSN12-like protein;
GN ORFNames=CBG18211;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SIMILARITY: Belongs to the CSN12 family. {ECO:0000305}.
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DR EMBL; HE600936; CAP35701.1; -; Genomic_DNA.
DR RefSeq; XP_002642232.1; XM_002642186.1.
DR AlphaFoldDB; Q60YJ7; -.
DR SMR; Q60YJ7; -.
DR STRING; 6238.CBG18211; -.
DR EnsemblMetazoa; CBG18211.1; CBG18211.1; WBGene00037671.
DR GeneID; 8584228; -.
DR KEGG; cbr:CBG_18211; -.
DR CTD; 8584228; -.
DR WormBase; CBG18211; CBP19247; WBGene00037671; -.
DR eggNOG; KOG2688; Eukaryota.
DR HOGENOM; CLU_031567_2_0_1; -.
DR InParanoid; Q60YJ7; -.
DR OMA; TYLIPCH; -.
DR OrthoDB; 706700at2759; -.
DR Proteomes; UP000008549; Chromosome III.
DR GO; GO:0070390; C:transcription export complex 2; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0016973; P:poly(A)+ mRNA export from nucleus; IBA:GO_Central.
DR GO; GO:0000973; P:post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IBA:GO_Central.
DR GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR045114; Csn12-like.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12732; PTHR12732; 1.
DR Pfam; PF01399; PCI; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..413
FT /note="PCI domain-containing protein 2 homolog"
FT /id="PRO_0000121033"
FT DOMAIN 222..403
FT /note="PCI"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01185"
SQ SEQUENCE 413 AA; 47146 MW; B8C4F5C58C435334 CRC64;
MSFVRNISDY FNKIDNLCYN QSWESGDKIA KYLSLNDDHS KEAYLHISEY GSTSRRCRVS
EDEIIDEIVC LHLHVLHSVH VAKDLISSQS TQIRIIQLFN KEILQKRKDE NWFLPIFYRL
CTDLRWLSKG AESCASGDDE GDSNANSFFE SAAKAITECY RTCVSDVHAE EGKTKKVAML
NMTNQLFQIY FQINKLNLLK PLIRAIDNCG PLYNKFLMAD KVAYNYFLGR KALFDGDLIL
AEKGLVYAFR NCPTESVSNK RKILVYLIPV KMFLGHMPTA SLLHRYRLDE FQEVVAAVKD
GHLGRVDNAL LTNGEFFIKC GIYLVLEKLR TITYRNLFKK VSQMVGKVQI PLDAFQAALR
FVGVTDVDMD ELECIIANLI AEKKVKGYLA HQHQKLVISK TNAFPTLSSV SSN