PCKA_SALTY
ID PCKA_SALTY Reviewed; 538 AA.
AC P41033;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 19-DEC-2001, sequence version 2.
DT 03-AUG-2022, entry version 140.
DE RecName: Full=Phosphoenolpyruvate carboxykinase (ATP) {ECO:0000255|HAMAP-Rule:MF_00453};
DE Short=PCK {ECO:0000255|HAMAP-Rule:MF_00453};
DE Short=PEP carboxykinase {ECO:0000255|HAMAP-Rule:MF_00453};
DE Short=PEPCK {ECO:0000255|HAMAP-Rule:MF_00453};
DE EC=4.1.1.49 {ECO:0000255|HAMAP-Rule:MF_00453};
GN Name=pckA {ECO:0000255|HAMAP-Rule:MF_00453}; Synonyms=pck;
GN OrderedLocusNames=STM3500;
OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Salmonella.
OX NCBI_TaxID=99287;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LT2 / SGSC1412 / ATCC 700720;
RX PubMed=11677609; DOI=10.1038/35101614;
RA McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P.,
RA Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D.,
RA Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E.,
RA Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R.,
RA Wilson R.K.;
RT "Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.";
RL Nature 413:852-856(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 251-538.
RC STRAIN=LT2;
RX PubMed=2845093; DOI=10.1016/0022-2836(88)90465-2;
RA Lijestroem P., Laamanen I., Palva E.T.;
RT "Structure and expression of the ompB operon, the regulatory locus for the
RT outer membrane porin regulon in Salmonella typhimurium LT-2.";
RL J. Mol. Biol. 201:663-673(1988).
RN [3]
RP FUNCTION, AND ACTIVITY REGULATION.
RX PubMed=1701430; DOI=10.1128/jb.172.12.7151-7156.1990;
RA Medina V., Pontarollo R., Glaeske D., Tabel H., Goldie H.;
RT "Sequence of the pckA gene of Escherichia coli K-12: relevance to genetic
RT and allosteric regulation and homology of E. coli phosphoenolpyruvate
RT carboxykinase with the enzymes from Trypanosoma brucei and Saccharomyces
RT cerevisiae.";
RL J. Bacteriol. 172:7151-7156(1990).
CC -!- FUNCTION: Involved in the gluconeogenesis. Catalyzes the conversion of
CC oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct
CC phosphoryl transfer between the nucleoside triphosphate and OAA.
CC {ECO:0000255|HAMAP-Rule:MF_00453, ECO:0000269|PubMed:1701430}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + oxaloacetate = ADP + CO2 + phosphoenolpyruvate;
CC Xref=Rhea:RHEA:18617, ChEBI:CHEBI:16452, ChEBI:CHEBI:16526,
CC ChEBI:CHEBI:30616, ChEBI:CHEBI:58702, ChEBI:CHEBI:456216;
CC EC=4.1.1.49; Evidence={ECO:0000255|HAMAP-Rule:MF_00453};
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00453};
CC Note=Binds 1 Mn(2+) ion per subunit. {ECO:0000255|HAMAP-Rule:MF_00453};
CC -!- ACTIVITY REGULATION: Allosterically activated by calcium.
CC {ECO:0000305|PubMed:1701430}.
CC -!- PATHWAY: Carbohydrate biosynthesis; gluconeogenesis.
CC {ECO:0000255|HAMAP-Rule:MF_00453}.
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_00453}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00453}.
CC -!- SIMILARITY: Belongs to the phosphoenolpyruvate carboxykinase (ATP)
CC family. {ECO:0000255|HAMAP-Rule:MF_00453}.
CC -!- SEQUENCE CAUTION:
CC Sequence=X12374; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AE006468; AAL22362.1; -; Genomic_DNA.
DR EMBL; X12374; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; NP_462403.2; NC_003197.2.
DR AlphaFoldDB; P41033; -.
DR SMR; P41033; -.
DR STRING; 99287.STM3500; -.
DR PaxDb; P41033; -.
DR EnsemblBacteria; AAL22362; AAL22362; STM3500.
DR GeneID; 1255023; -.
DR KEGG; stm:STM3500; -.
DR PATRIC; fig|99287.12.peg.3699; -.
DR HOGENOM; CLU_018247_0_1_6; -.
DR PhylomeDB; P41033; -.
DR UniPathway; UPA00138; -.
DR Proteomes; UP000001014; Chromosome.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004612; F:phosphoenolpyruvate carboxykinase (ATP) activity; IBA:GO_Central.
DR GO; GO:0006094; P:gluconeogenesis; IBA:GO_Central.
DR CDD; cd00484; PEPCK_ATP; 1.
DR Gene3D; 3.40.449.10; -; 1.
DR Gene3D; 3.90.228.20; -; 1.
DR HAMAP; MF_00453; PEPCK_ATP; 1.
DR InterPro; IPR001272; PEP_carboxykinase_ATP.
DR InterPro; IPR013035; PEP_carboxykinase_C.
DR InterPro; IPR008210; PEP_carboxykinase_N.
DR InterPro; IPR015994; PEPCK_ATP_CS.
DR PANTHER; PTHR30031; PTHR30031; 1.
DR Pfam; PF01293; PEPCK_ATP; 1.
DR PIRSF; PIRSF006294; PEP_crbxkin; 1.
DR SUPFAM; SSF68923; SSF68923; 1.
DR TIGRFAMs; TIGR00224; pckA; 1.
DR PROSITE; PS00532; PEPCK_ATP; 1.
PE 3: Inferred from homology;
KW ATP-binding; Calcium; Cytoplasm; Decarboxylase; Gluconeogenesis; Lyase;
KW Manganese; Metal-binding; Nucleotide-binding; Reference proteome.
FT CHAIN 1..538
FT /note="Phosphoenolpyruvate carboxykinase (ATP)"
FT /id="PRO_0000203840"
FT BINDING 64
FT /ligand="substrate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 149
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 151
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 206
FT /ligand="substrate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 212
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 212
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 212
FT /ligand="substrate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 231
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 231
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 247..255
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 268
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 296
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 332
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 332
FT /ligand="substrate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 447..448
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
FT BINDING 453
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00453"
SQ SEQUENCE 538 AA; 59576 MW; 8502FF986D22860A CRC64;
MRVNNLTPQD LKAYGINDVQ DIVYNPSYDT LYQEELNPGL EGYERGVLTN LGAVAVDTGI
FTGRSPKDKY IVRDDTTRDT LWWSDKGKGK NDNKPLSQET WQHLKGLVTH QLSGKRLFIV
DAFCGANADT RLSVRFITEV AWQAHFVKNM FIRPTDEELV GFKPDFIVMN GAKCTNPQWK
EQGLNSENFV AFNLTERIQL IGGTWYGGEM KKGMFSVMNY LLPLKGIASM HCSANVGEKG
DVAVFFGLSG TGKTTLSTDP KRRLIGDDEH GWDDDGVFNF EGGCYAKTIK LSKEAEPEIY
HAIRRDALLE NVTVREDGTV DFDDGSKTEN TRVSYPIYHI DNIVKPVSKA GHATKVIFLT
ADFGVLPPVS RLTANQTQYH FLSGFTAKLA GTERGVTEPT PTFSACFGAA FLTLHPTQYA
EVLVKRMQAA GAQAYLVNTG WNGTGKRISI KDTRAIIDAI LNGSLDNAET FRLPLFDLAI
PTELPGVDTH ILDPRNTYAS PEQWQEKATA LAKLFIENFE KYTDTPAGEA LVSAGPKL
