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PCKGC_PONAB
ID   PCKGC_PONAB             Reviewed;         622 AA.
AC   Q5R5J1;
DT   25-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT   21-DEC-2004, sequence version 1.
DT   03-AUG-2022, entry version 95.
DE   RecName: Full=Phosphoenolpyruvate carboxykinase, cytosolic [GTP] {ECO:0000305};
DE            Short=PEPCK-C;
DE            EC=4.1.1.32 {ECO:0000250|UniProtKB:P35558};
DE   AltName: Full=Serine-protein kinase PCK1 {ECO:0000305};
DE            EC=2.7.11.- {ECO:0000250|UniProtKB:P35558};
GN   Name=PCK1 {ECO:0000250|UniProtKB:P35558}; Synonyms=PPCK1;
OS   Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pongo.
OX   NCBI_TaxID=9601;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Kidney;
RG   The German cDNA consortium;
RL   Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Cytosolic phosphoenolpyruvate carboxykinase that catalyzes
CC       the reversible decarboxylation and phosphorylation of oxaloacetate
CC       (OAA) and acts as the rate-limiting enzyme in gluconeogenesis.
CC       Regulates cataplerosis and anaplerosis, the processes that control the
CC       levels of metabolic intermediates in the citric acid cycle. At low
CC       glucose levels, it catalyzes the cataplerotic conversion of
CC       oxaloacetate to phosphoenolpyruvate (PEP), the rate-limiting step in
CC       the metabolic pathway that produces glucose from lactate and other
CC       precursors derived from the citric acid cycle. At high glucose levels,
CC       it catalyzes the anaplerotic conversion of phosphoenolpyruvate to
CC       oxaloacetate (By similarity). Acts as a regulator of formation and
CC       maintenance of memory CD8(+) T-cells: up-regulated in these cells,
CC       where it generates phosphoenolpyruvate, via gluconeogenesis. The
CC       resultant phosphoenolpyruvate flows to glycogen and pentose phosphate
CC       pathway, which is essential for memory CD8(+) T-cells homeostasis (By
CC       similarity). In addition to the phosphoenolpyruvate carboxykinase
CC       activity, also acts as a protein kinase when phosphorylated at Ser-90:
CC       phosphorylation at Ser-90 by AKT1 reduces the binding affinity to
CC       oxaloacetate and promotes an atypical serine protein kinase activity
CC       using GTP as donor. The protein kinase activity regulates lipogenesis:
CC       upon phosphorylation at Ser-90, translocates to the endoplasmic
CC       reticulum and catalyzes phosphorylation of INSIG proteins (INSIG1 and
CC       INSIG2), thereby disrupting the interaction between INSIG proteins and
CC       SCAP and promoting nuclear translocation of SREBP proteins
CC       (SREBF1/SREBP1 or SREBF2/SREBP2) and subsequent transcription of
CC       downstream lipogenesis-related genes (By similarity).
CC       {ECO:0000250|UniProtKB:P35558, ECO:0000250|UniProtKB:Q9Z2V4}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=GTP + oxaloacetate = CO2 + GDP + phosphoenolpyruvate;
CC         Xref=Rhea:RHEA:10388, ChEBI:CHEBI:16452, ChEBI:CHEBI:16526,
CC         ChEBI:CHEBI:37565, ChEBI:CHEBI:58189, ChEBI:CHEBI:58702; EC=4.1.1.32;
CC         Evidence={ECO:0000250|UniProtKB:P35558};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:10389;
CC         Evidence={ECO:0000250|UniProtKB:P35558};
CC       PhysiologicalDirection=right-to-left; Xref=Rhea:RHEA:10390;
CC         Evidence={ECO:0000250|UniProtKB:P35558};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=GTP + L-seryl-[protein] = GDP + H(+) + O-phospho-L-seryl-
CC         [protein]; Xref=Rhea:RHEA:64020, Rhea:RHEA-COMP:9863, Rhea:RHEA-
CC         COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:37565,
CC         ChEBI:CHEBI:58189, ChEBI:CHEBI:83421;
CC         Evidence={ECO:0000250|UniProtKB:P35558};
CC       PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:64021;
CC         Evidence={ECO:0000250|UniProtKB:P35558};
CC   -!- COFACTOR:
CC       Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC         Evidence={ECO:0000250|UniProtKB:P35558};
CC       Note=Binds 1 Mn(2+) ion per subunit. {ECO:0000250|UniProtKB:P35558};
CC   -!- ACTIVITY REGULATION: Phosphoenolpyruvate carboxykinase activity is
CC       regulated by acetylation and glucose levels (By similarity). The
CC       anaplerotic conversion of phosphoenolpyruvate to oxaloacetate is
CC       improved by PCK1 acetylation on Lys-91 (K91ac), Lys-473 (K473ac) and
CC       Lys-521 (K521ac) (By similarity). High glucose concentrations favor
CC       PCK1 anaplerotic activity by triggering acetylation on Lys-91 (K91ac).
CC       At low glucose levels, SIRT1-mediated deacetylation of Lys-91 promotes
CC       the cataplerotic conversion of oxaloacetate to phosphoenolpyruvate.
CC       Phosphorylation at Ser-90 reduces the binding affinity to oxaloacetate
CC       and converts the enzyme into an atypical protein kinase using GTP as
CC       donor (By similarity). {ECO:0000250|UniProtKB:P07379,
CC       ECO:0000250|UniProtKB:P35558}.
CC   -!- PATHWAY: Carbohydrate biosynthesis; gluconeogenesis.
CC       {ECO:0000250|UniProtKB:P35558}.
CC   -!- SUBUNIT: Monomer. {ECO:0000250|UniProtKB:P35558}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC       {ECO:0000250|UniProtKB:P35558}. Endoplasmic reticulum
CC       {ECO:0000250|UniProtKB:P35558}. Note=Phosphorylation at Ser-90 promotes
CC       translocation to the endoplasmic reticulum.
CC       {ECO:0000250|UniProtKB:P35558}.
CC   -!- PTM: Acetylated. Lysine acetylation by p300/EP300 is increased on high
CC       glucose conditions. Lysine acetylation promotes ubiquitination by UBR5.
CC       Acetylation is enhanced in the presence of BAG6. Deacetylated by SIRT2.
CC       Deacetylation of Lys-91 is carried out by SIRT1 and depends on PCK1
CC       phosphorylation levels. {ECO:0000250|UniProtKB:P35558}.
CC   -!- PTM: Phosphorylated in a GSK3B-mediated pathway; phosphorylation
CC       affects the efficiency of SIRT1-mediated deacetylation, and regulates
CC       PCK1 ubiquitination and degradation. Phosphorylation at Ser-90 by AKT1
CC       reduces the binding affinity to oxaloacetate and promotes the protein
CC       kinase activity: phosphorylated PCK1 translocates to the endoplasmic
CC       reticulum, where it phosphorylates INSIG1 and INSIG2.
CC       {ECO:0000250|UniProtKB:P35558}.
CC   -!- PTM: Ubiquitination by UBR5 leads to proteasomal degradation.
CC       {ECO:0000250|UniProtKB:P35558}.
CC   -!- MISCELLANEOUS: In eukaryotes there are two isozymes: a cytoplasmic one
CC       and a mitochondrial one.
CC   -!- SIMILARITY: Belongs to the phosphoenolpyruvate carboxykinase [GTP]
CC       family. {ECO:0000305}.
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DR   EMBL; CR860867; CAH92975.1; -; mRNA.
DR   RefSeq; NP_001126758.1; NM_001133286.1.
DR   AlphaFoldDB; Q5R5J1; -.
DR   SMR; Q5R5J1; -.
DR   STRING; 9601.ENSPPYP00000012471; -.
DR   GeneID; 100173760; -.
DR   KEGG; pon:100173760; -.
DR   CTD; 5105; -.
DR   eggNOG; KOG3749; Eukaryota.
DR   InParanoid; Q5R5J1; -.
DR   OrthoDB; 286671at2759; -.
DR   UniPathway; UPA00138; -.
DR   Proteomes; UP000001595; Unplaced.
DR   GO; GO:0005829; C:cytosol; ISS:UniProtKB.
DR   GO; GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.
DR   GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004613; F:phosphoenolpyruvate carboxykinase (GTP) activity; ISS:UniProtKB.
DR   GO; GO:0106264; F:protein serine kinase activity (using GTP as donor); ISS:UniProtKB.
DR   GO; GO:0071333; P:cellular response to glucose stimulus; ISS:UniProtKB.
DR   GO; GO:0032869; P:cellular response to insulin stimulus; ISS:UniProtKB.
DR   GO; GO:0006094; P:gluconeogenesis; IEA:UniProtKB-UniPathway.
DR   GO; GO:0006107; P:oxaloacetate metabolic process; ISS:UniProtKB.
DR   GO; GO:0018105; P:peptidyl-serine phosphorylation; ISS:UniProtKB.
DR   GO; GO:0043382; P:positive regulation of memory T cell differentiation; ISS:UniProtKB.
DR   GO; GO:0046890; P:regulation of lipid biosynthetic process; ISS:UniProtKB.
DR   CDD; cd00819; PEPCK_GTP; 1.
DR   Gene3D; 3.40.449.10; -; 1.
DR   Gene3D; 3.90.228.20; -; 1.
DR   HAMAP; MF_00452; PEPCK_GTP; 1.
DR   InterPro; IPR018091; PEP_carboxykin_GTP_CS.
DR   InterPro; IPR013035; PEP_carboxykinase_C.
DR   InterPro; IPR008209; PEP_carboxykinase_GTP.
DR   InterPro; IPR035077; PEP_carboxykinase_GTP_C.
DR   InterPro; IPR035078; PEP_carboxykinase_GTP_N.
DR   InterPro; IPR008210; PEP_carboxykinase_N.
DR   PANTHER; PTHR11561; PTHR11561; 1.
DR   Pfam; PF00821; PEPCK_GTP; 1.
DR   Pfam; PF17297; PEPCK_N; 1.
DR   PIRSF; PIRSF001348; PEP_carboxykinase_GTP; 1.
DR   SUPFAM; SSF68923; SSF68923; 1.
DR   PROSITE; PS00505; PEPCK_GTP; 1.
PE   2: Evidence at transcript level;
KW   Acetylation; Cytoplasm; Decarboxylase; Endoplasmic reticulum;
KW   Gluconeogenesis; GTP-binding; Kinase; Lyase; Manganese; Metal-binding;
KW   Nucleotide-binding; Phosphoprotein; Reference proteome; Transferase;
KW   Ubl conjugation.
FT   CHAIN           1..622
FT                   /note="Phosphoenolpyruvate carboxykinase, cytosolic [GTP]"
FT                   /id="PRO_0000103629"
FT   REGION          457..487
FT                   /note="Omega-loop"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   ACT_SITE        288
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         87
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         235..237
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         244
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         264
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         286
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         287..292
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         311
FT                   /ligand="Mn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29035"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         403..405
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         405
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         436
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   BINDING         530..533
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   MOD_RES         19
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P35558"
FT   MOD_RES         70
FT                   /note="N6-acetyllysine; by p300/EP300"
FT                   /evidence="ECO:0000250|UniProtKB:P35558"
FT   MOD_RES         71
FT                   /note="N6-acetyllysine; by p300/EP300"
FT                   /evidence="ECO:0000250|UniProtKB:P35558"
FT   MOD_RES         90
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P35558"
FT   MOD_RES         91
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P07379,
FT                   ECO:0000250|UniProtKB:P35558"
FT   MOD_RES         118
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9Z2V4"
FT   MOD_RES         178
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:Q16822"
FT   MOD_RES         286
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q16822"
FT   MOD_RES         473
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   MOD_RES         521
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   MOD_RES         524
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P07379"
FT   MOD_RES         594
FT                   /note="N6-acetyllysine; by p300/EP300"
FT                   /evidence="ECO:0000250|UniProtKB:P35558"
SQ   SEQUENCE   622 AA;  69019 MW;  1776D83AA62103E2 CRC64;
     MPPQLQNGLN LSAKVVQGSL DSLPQAVRKF LENNAELCQP DHIHICDGSE EENGRLLGQM
     EEEGILRRLK KYDNCWLALT DPRDVARIGS KTVIVTQEQR DTVPIPKTGL SQLGRWMSEE
     DFEKALNARF PGCMKGRTMY VIPFSMGPLG SPLSKIGIEL TDSPYVVASM RIMTRMGTPV
     LEALGDGEFV KCLHSVGCPL PLQKPLVNNW PCNPELTLIA HLPDRREIIS FGSGYGGNSL
     LGKKCFALRM ASRLAKEEGW LAEHMLILGI TNPEGEKKYL AAAFPSACGK TNLAMMNPSL
     PGWKVECVGD DIAWMKFDAQ GHLRAINPEN GFFGVAPGTS VKTNPNAIKT IQKNTIFTNV
     AETSDGGVYW EGIDEPLASG VTITSWKNKE WSPEDGEPCA HPNSRFCTPA SQCPIIDAAW
     ESPEGVPIEG IIFGGRRPAG VPLVYEALSW QHGVFVGAAM RSEATAAAEH KGKIIMHDPF
     AMRPFFGYNF GKYLAHWLSM AQHPAAKLPK IFHVNWFRKD KEGKFLWPGF GENSRVLEWM
     FNRIDGKAGA KLTPIGYIPK EDALNLKGLG HINVMELFSI SKEFWEKEVE DIEKYLEDQV
     NADLPCEIER EILALKQRIS QM
 
 
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