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PCL10_YEAST
ID   PCL10_YEAST             Reviewed;         433 AA.
AC   P53124; D6VU15;
DT   01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-1996, sequence version 1.
DT   03-AUG-2022, entry version 141.
DE   RecName: Full=PHO85 cyclin-10;
GN   Name=PCL10; OrderedLocusNames=YGL134W; ORFNames=G2838;
OS   Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Saccharomyces.
OX   NCBI_TaxID=559292;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=ATCC 96604 / S288c / FY1679;
RX   PubMed=8840506;
RX   DOI=10.1002/(sici)1097-0061(199607)12:9<887::aid-yea971>3.0.co;2-d;
RA   Escribano V., Eraso P., Portillo F., Mazon M.J.;
RT   "Sequence analysis of a 14.6 kb DNA fragment of Saccharomyces cerevisiae
RT   chromosome VII reveals SEC27, SSM1b, a putative S-adenosylmethionine-
RT   dependent enzyme and six new open reading frames.";
RL   Yeast 12:887-892(1996).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=9169869;
RA   Tettelin H., Agostoni-Carbone M.L., Albermann K., Albers M., Arroyo J.,
RA   Backes U., Barreiros T., Bertani I., Bjourson A.J., Brueckner M.,
RA   Bruschi C.V., Carignani G., Castagnoli L., Cerdan E., Clemente M.L.,
RA   Coblenz A., Coglievina M., Coissac E., Defoor E., Del Bino S., Delius H.,
RA   Delneri D., de Wergifosse P., Dujon B., Durand P., Entian K.-D., Eraso P.,
RA   Escribano V., Fabiani L., Fartmann B., Feroli F., Feuermann M.,
RA   Frontali L., Garcia-Gonzalez M., Garcia-Saez M.I., Goffeau A.,
RA   Guerreiro P., Hani J., Hansen M., Hebling U., Hernandez K., Heumann K.,
RA   Hilger F., Hofmann B., Indge K.J., James C.M., Klima R., Koetter P.,
RA   Kramer B., Kramer W., Lauquin G., Leuther H., Louis E.J., Maillier E.,
RA   Marconi A., Martegani E., Mazon M.J., Mazzoni C., McReynolds A.D.K.,
RA   Melchioretto P., Mewes H.-W., Minenkova O., Mueller-Auer S., Nawrocki A.,
RA   Netter P., Neu R., Nombela C., Oliver S.G., Panzeri L., Paoluzi S.,
RA   Plevani P., Portetelle D., Portillo F., Potier S., Purnelle B., Rieger M.,
RA   Riles L., Rinaldi T., Robben J., Rodrigues-Pousada C.,
RA   Rodriguez-Belmonte E., Rodriguez-Torres A.M., Rose M., Ruzzi M.,
RA   Saliola M., Sanchez-Perez M., Schaefer B., Schaefer M., Scharfe M.,
RA   Schmidheini T., Schreer A., Skala J., Souciet J.-L., Steensma H.Y.,
RA   Talla E., Thierry A., Vandenbol M., van der Aart Q.J.M., Van Dyck L.,
RA   Vanoni M., Verhasselt P., Voet M., Volckaert G., Wambutt R., Watson M.D.,
RA   Weber N., Wedler E., Wedler H., Wipfli P., Wolf K., Wright L.F.,
RA   Zaccaria P., Zimmermann M., Zollner A., Kleine K.;
RT   "The nucleotide sequence of Saccharomyces cerevisiae chromosome VII.";
RL   Nature 387:81-84(1997).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=24374639; DOI=10.1534/g3.113.008995;
RA   Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R.,
RA   Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S.,
RA   Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.;
RT   "The reference genome sequence of Saccharomyces cerevisiae: Then and now.";
RL   G3 (Bethesda) 4:389-398(2014).
RN   [4]
RP   INTERACTION WITH PHO85.
RX   PubMed=9032248; DOI=10.1128/mcb.17.3.1212;
RA   Measday V., Moore L., Retnakaran R., Lee J., Donoviel M., Neiman A.M.,
RA   Andrews B.J.;
RT   "A family of cyclin-like proteins that interact with the Pho85 cyclin-
RT   dependent kinase.";
RL   Mol. Cell. Biol. 17:1212-1223(1997).
RN   [5]
RP   FUNCTION, PHOSPHORYLATION OF GSY2, AND INTERACTION WITH GSY2.
RX   PubMed=9584169; DOI=10.1128/mcb.18.6.3289;
RA   Huang D., Moffat J., Wilson W.A., Moore L., Cheng C., Roach P.J.,
RA   Andrews B.J.;
RT   "Cyclin partners determine Pho85 protein kinase substrate specificity in
RT   vitro and in vivo: control of glycogen biosynthesis by Pcl8 and Pcl10.";
RL   Mol. Cell. Biol. 18:3289-3299(1998).
RN   [6]
RP   FUNCTION, AND INTERACTION WITH GSY2 AND PHO85.
RX   PubMed=10490639; DOI=10.1128/mcb.19.10.7020;
RA   Wilson W.A., Mahrenholz A.M., Roach P.J.;
RT   "Substrate targeting of the yeast cyclin-dependent kinase Pho85p by the
RT   cyclin Pcl10p.";
RL   Mol. Cell. Biol. 19:7020-7030(1999).
RN   [7]
RP   FUNCTION.
RX   PubMed=12407105; DOI=10.1074/jbc.m208058200;
RA   Tan Y.S.H., Morcos P.A., Cannon J.F.;
RT   "Pho85 phosphorylates the Glc7 protein phosphatase regulator Glc8 in
RT   vivo.";
RL   J. Biol. Chem. 278:147-153(2003).
RN   [8]
RP   SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX   PubMed=14562095; DOI=10.1038/nature02026;
RA   Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W.,
RA   Weissman J.S., O'Shea E.K.;
RT   "Global analysis of protein localization in budding yeast.";
RL   Nature 425:686-691(2003).
RN   [9]
RP   LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
RX   PubMed=14562106; DOI=10.1038/nature02046;
RA   Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N.,
RA   O'Shea E.K., Weissman J.S.;
RT   "Global analysis of protein expression in yeast.";
RL   Nature 425:737-741(2003).
CC   -!- FUNCTION: Cyclin partner of the cyclin-dependent kinase (CDK) PHO85.
CC       Together with cyclin PCL8, negatively controls glycogen accumulation
CC       under favorable growth conditions. The PCL10-PHO85 cyclin-CDK
CC       holoenzyme has glycogen synthase kinase activity and phosphorylates and
CC       negatively regulates glycogen synthase GSY2. Also has minor GLC8 kinase
CC       activity. {ECO:0000269|PubMed:10490639, ECO:0000269|PubMed:12407105,
CC       ECO:0000269|PubMed:9584169}.
CC   -!- SUBUNIT: Forms a cyclin-CDK complex with PHO85. Interacts with GSY2,
CC       independent of the presence of PHO85. {ECO:0000269|PubMed:10490639,
CC       ECO:0000269|PubMed:9032248, ECO:0000269|PubMed:9584169}.
CC   -!- INTERACTION:
CC       P53124; P17157: PHO85; NbExp=6; IntAct=EBI-23973, EBI-13327;
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:14562095}.
CC   -!- MISCELLANEOUS: Present with 217 molecules/cell in log phase SD medium.
CC       {ECO:0000269|PubMed:14562106}.
CC   -!- SIMILARITY: Belongs to the cyclin family. PHO80 subfamily.
CC       {ECO:0000305}.
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DR   EMBL; Z72656; CAA96845.1; -; Genomic_DNA.
DR   EMBL; BK006941; DAA07976.1; -; Genomic_DNA.
DR   PIR; S64147; S64147.
DR   RefSeq; NP_011381.1; NM_001180999.1.
DR   PDB; 4KRC; X-ray; 2.60 A; B=227-433.
DR   PDB; 4KRD; X-ray; 1.95 A; B=227-433.
DR   PDBsum; 4KRC; -.
DR   PDBsum; 4KRD; -.
DR   AlphaFoldDB; P53124; -.
DR   SMR; P53124; -.
DR   BioGRID; 33118; 55.
DR   ComplexPortal; CPX-1692; PCL10-PHO85 kinase complex.
DR   DIP; DIP-1494N; -.
DR   IntAct; P53124; 13.
DR   MINT; P53124; -.
DR   STRING; 4932.YGL134W; -.
DR   iPTMnet; P53124; -.
DR   MaxQB; P53124; -.
DR   PaxDb; P53124; -.
DR   PRIDE; P53124; -.
DR   EnsemblFungi; YGL134W_mRNA; YGL134W; YGL134W.
DR   GeneID; 852743; -.
DR   KEGG; sce:YGL134W; -.
DR   SGD; S000003102; PCL10.
DR   VEuPathDB; FungiDB:YGL134W; -.
DR   eggNOG; KOG1674; Eukaryota.
DR   GeneTree; ENSGT00390000000862; -.
DR   HOGENOM; CLU_043984_0_0_1; -.
DR   InParanoid; P53124; -.
DR   OMA; DSIFSEC; -.
DR   BioCyc; YEAST:G3O-30629-MON; -.
DR   PRO; PR:P53124; -.
DR   Proteomes; UP000002311; Chromosome VII.
DR   RNAct; P53124; protein.
DR   GO; GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IPI:SGD.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0016538; F:cyclin-dependent protein serine/threonine kinase regulator activity; IDA:SGD.
DR   GO; GO:0019901; F:protein kinase binding; IEA:InterPro.
DR   GO; GO:0005977; P:glycogen metabolic process; IEA:UniProtKB-KW.
DR   GO; GO:0045719; P:negative regulation of glycogen biosynthetic process; IMP:SGD.
DR   GO; GO:0000079; P:regulation of cyclin-dependent protein serine/threonine kinase activity; IDA:SGD.
DR   GO; GO:0005979; P:regulation of glycogen biosynthetic process; IC:ComplexPortal.
DR   InterPro; IPR013922; Cyclin_PHO80-like.
DR   PANTHER; PTHR15615; PTHR15615; 1.
DR   Pfam; PF08613; Cyclin; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Carbohydrate metabolism; Cyclin; Cytoplasm;
KW   Glycogen metabolism; Reference proteome.
FT   CHAIN           1..433
FT                   /note="PHO85 cyclin-10"
FT                   /id="PRO_0000202740"
FT   REGION          1..20
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          51..81
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..19
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        51..67
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   HELIX           246..248
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           262..280
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           291..298
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           310..321
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           325..339
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   STRAND          340..342
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   STRAND          348..350
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           356..358
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           359..374
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           381..388
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           392..406
FT                   /evidence="ECO:0007829|PDB:4KRD"
FT   HELIX           415..429
FT                   /evidence="ECO:0007829|PDB:4KRD"
SQ   SEQUENCE   433 AA;  48584 MW;  DE6608A34BDBDF99 CRC64;
     MDMTKNHTTD TEEFDDGDIR PVSLGIVDDY NASFELPLKP KFLQSENFSD LTSEWDQSRS
     NTPGLAEGKT EKAQPCGTTD SSKNRIHVEQ LLESANEMNN YLAQNIENIN NFQVGLLNGG
     KGLYSSMGDD SSACINGTNF SSTSNFELSD DELEDTTGCT SSIFDKDLFH QQNGLSIPRR
     RSPLFKSPTA SFEIGDATDV EEQDIDDSIF SECSSITSFD MGGLHISLPH DEEEDQEKTK
     SESENPLLHG IPVDVEVPHI SVDEALANFK ETIELLLKLS GNRKCTGFNT RVEKKEYSNF
     YMKSKPTLSS ADFLKRIQDK CEYQPTVYLV ATFLIDTLFL TRDGNNILQL KLNLQEKEVH
     RMIIAAVRLS TKLLEDFVHS HEYFSKVCGI SKRLLTKLEV SLLICVCNTK LMVSNRKLAA
     SKLLLNELRS FCV
 
 
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