PDAT2_ARATH
ID PDAT2_ARATH Reviewed; 665 AA.
AC Q9FYC7;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Putative phospholipid:diacylglycerol acyltransferase 2;
DE Short=AtPDAT2;
DE EC=2.3.1.158 {ECO:0000250|UniProtKB:O94680};
GN Name=PDAT2; OrderedLocusNames=At3g44830; ORFNames=F28D10.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15355352; DOI=10.1111/j.1432-1033.2004.04317.x;
RA Noiriel A., Benveniste P., Banas A., Stymne S., Bouvier-Nave P.;
RT "Expression in yeast of a novel phospholipase A1 cDNA from Arabidopsis
RT thaliana.";
RL Eur. J. Biochem. 271:3752-3764(2004).
RN [4]
RP GENE FAMILY.
RX PubMed=15247387; DOI=10.1104/pp.104.044354;
RA Stahl U., Carlsson A.S., Lenman M., Dahlqvist A., Huang B., Banas W.,
RA Banas A., Stymne S.;
RT "Cloning and functional characterization of a phospholipid:diacylglycerol
RT acyltransferase from Arabidopsis.";
RL Plant Physiol. 135:1324-1335(2004).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 1,2-diacyl-sn-glycerol + a glycerophospholipid = a
CC monoacylglycerophospholipid + a triacyl-sn-glycerol;
CC Xref=Rhea:RHEA:14057, ChEBI:CHEBI:17815, ChEBI:CHEBI:64615,
CC ChEBI:CHEBI:136912, ChEBI:CHEBI:136913; EC=2.3.1.158;
CC Evidence={ECO:0000250|UniProtKB:O94680};
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AB hydrolase superfamily. Lipase family.
CC {ECO:0000305}.
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DR EMBL; AL391254; CAC03533.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE77959.1; -; Genomic_DNA.
DR PIR; T51780; T51780.
DR RefSeq; NP_190069.1; NM_114352.2.
DR AlphaFoldDB; Q9FYC7; -.
DR STRING; 3702.AT3G44830.1; -.
DR ESTHER; arath-PDAT2; PC-sterol_acyltransferase.
DR PaxDb; Q9FYC7; -.
DR PRIDE; Q9FYC7; -.
DR ProteomicsDB; 236288; -.
DR EnsemblPlants; AT3G44830.1; AT3G44830.1; AT3G44830.
DR GeneID; 823617; -.
DR Gramene; AT3G44830.1; AT3G44830.1; AT3G44830.
DR KEGG; ath:AT3G44830; -.
DR Araport; AT3G44830; -.
DR TAIR; locus:2082147; AT3G44830.
DR eggNOG; KOG2369; Eukaryota.
DR HOGENOM; CLU_016065_1_0_1; -.
DR InParanoid; Q9FYC7; -.
DR OMA; WLIGYLC; -.
DR OrthoDB; 828056at2759; -.
DR PhylomeDB; Q9FYC7; -.
DR BioCyc; ARA:AT3G44830-MON; -.
DR BRENDA; 2.3.1.158; 399.
DR PRO; PR:Q9FYC7; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9FYC7; baseline and differential.
DR Genevisible; Q9FYC7; AT.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0008374; F:O-acyltransferase activity; IEA:InterPro.
DR GO; GO:0046027; F:phospholipid:diacylglycerol acyltransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IBA:GO_Central.
DR Gene3D; 3.40.50.1820; -; 1.
DR InterPro; IPR029058; AB_hydrolase.
DR InterPro; IPR003386; LACT/PDAT_acylTrfase.
DR Pfam; PF02450; LCAT; 1.
DR SUPFAM; SSF53474; SSF53474; 1.
PE 3: Inferred from homology;
KW Acyltransferase; Glycerol metabolism; Lipid biosynthesis; Lipid metabolism;
KW Membrane; Reference proteome; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..665
FT /note="Putative phospholipid:diacylglycerol acyltransferase
FT 2"
FT /id="PRO_0000398612"
FT TRANSMEM 48..68
FT /note="Helical"
FT /evidence="ECO:0000255"
FT ACT_SITE 237
FT /note="Acyl-ester intermediate"
FT /evidence="ECO:0000255"
FT ACT_SITE 567
FT /note="Charge relay system"
FT /evidence="ECO:0000250"
FT ACT_SITE 620
FT /note="Charge relay system"
FT /evidence="ECO:0000250"
SQ SEQUENCE 665 AA; 73653 MW; 3F63789FC1AEB8AF CRC64;
MSPLLRFRKL SSFSEDTINP KPKQSATVEK PKRRRSGRCS CVDSCCWLIG YLCTAWWLLL
FLYHSVPVPA MLQAPESPGT RLSRDGVKAF HPVILVPGIV TGGLELWEGR PCAEGLFRKR
LWGASFSEIL RRPLCWLEHL SLDSETGLDP SGIRVRAVPG LVAADYFAPC YFAWAVLIEN
LAKIGYEGKN LHMASYDWRL SFHNTEVRDQ SLSRLKSKIE LMYATNGFKK VVVVPHSMGA
IYFLHFLKWV ETPLPDGGGG GGPGWCAKHI KSVVNIGPAF LGVPKAVSNL LSAEGKDIAY
ARSLAPGLLD SELLKLQTLE HLMRMSHSWD SIVSLLPKGG EAIWGDLDSH AEEGLNCIYS
KRKSSQLSLS NLHKQNYSLK PVSRVKEPAK YGRIVSFGKR ASELPSSQLS TLNVKELSRV
DGNSNDSTSC GEFWSEYNEM SRESIVKVAE NTAYTATTVL DLLRFIAPKM MRRAEAHFSH
GIADDLDDPK YGHYKYWSNP LETKLPEAPE MEMYCLYGVG IPTERSYIYK LATSSGKCKS
SIPFRIDGSL DGDDVCLKGG TRFADGDESV PVISAGFMCA KGWRGKTRFN PSGMDTFLRE
YKHKPPGSLL ESRGTESGAH VDIMGNVGLI EDVLRIAAGA SGQEIGGDRI YSDVMRMSER
ISIKL