PDCT2_ARATH
ID PDCT2_ARATH Reviewed; 296 AA.
AC Q9LVZ6;
DT 22-JAN-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Phosphatidylcholine:diacylglycerol cholinephosphotransferase 2;
DE Short=AtPDCT2;
DE EC=2.7.8.-;
GN OrderedLocusNames=At3g15830; ORFNames=MSJ11.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Functions as phosphatidylcholine:diacylglycerol
CC cholinephosphotransferase that catalyzes the transfer of the
CC phosphocholine headgroup from phosphatidylcholine (PC) to
CC diacylglycerol, a major reaction for the transfer of 18:1 into
CC phosphatidylcholine for desaturation and also for the reverse transfer
CC of 18:2 and 18:3 into the triacylglycerols synthesis pathway.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the phosphatidylcholine:diacylglycerol
CC cholinephosphotransferase family. {ECO:0000305}.
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DR EMBL; AB017071; BAB02314.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75731.1; -; Genomic_DNA.
DR EMBL; DR288877; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; DR378318; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; NP_188204.1; NM_112453.3.
DR AlphaFoldDB; Q9LVZ6; -.
DR STRING; 3702.AT3G15830.1; -.
DR PaxDb; Q9LVZ6; -.
DR PRIDE; Q9LVZ6; -.
DR EnsemblPlants; AT3G15830.1; AT3G15830.1; AT3G15830.
DR GeneID; 820826; -.
DR Gramene; AT3G15830.1; AT3G15830.1; AT3G15830.
DR KEGG; ath:AT3G15830; -.
DR Araport; AT3G15830; -.
DR TAIR; locus:2093272; AT3G15830.
DR eggNOG; ENOG502QRYQ; Eukaryota.
DR HOGENOM; CLU_079484_0_0_1; -.
DR InParanoid; Q9LVZ6; -.
DR OMA; QMVYIVW; -.
DR OrthoDB; 895973at2759; -.
DR PhylomeDB; Q9LVZ6; -.
DR PRO; PR:Q9LVZ6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LVZ6; baseline and differential.
DR Genevisible; Q9LVZ6; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0004142; F:diacylglycerol cholinephosphotransferase activity; ISS:UniProtKB.
DR GO; GO:0046470; P:phosphatidylcholine metabolic process; ISS:UniProtKB.
PE 2: Evidence at transcript level;
KW Lipid metabolism; Membrane; Reference proteome; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..296
FT /note="Phosphatidylcholine:diacylglycerol
FT cholinephosphotransferase 2"
FT /id="PRO_0000425111"
FT TRANSMEM 83..103
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 136..156
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 165..182
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 198..218
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 250..270
FT /note="Helical"
FT /evidence="ECO:0000255"
FT ACT_SITE 211
FT /evidence="ECO:0000250"
FT ACT_SITE 251
FT /evidence="ECO:0000250"
FT ACT_SITE 255
FT /evidence="ECO:0000250"
FT CONFLICT 125
FT /note="S -> N (in Ref. 3; DR288877/DR378318)"
FT /evidence="ECO:0000305"
FT CONFLICT 233
FT /note="V -> F (in Ref. 3; DR378318)"
FT /evidence="ECO:0000305"
FT CONFLICT 274
FT /note="E -> K (in Ref. 3; DR378318)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 296 AA; 32691 MW; B5BCD83423353EFE CRC64;
MSDAVTKTVA PLRRKANPIN GKHTNGVTID GIFDDHNRQI GPINSQMEDI AQKTDDGGGG
EWTSKASFMT WTMHDIIYVA RHHWIPCLFA AGVMFFTVVE YTFQMTPASS QPFDLGFVAT
RYLHSILASS PNLNTVLAAL NTILVGMQTT YIGCTWAVEG RPRATIAALF MFTCRGILGY
STQLPRPQEF LGSGVDYPVG NVSFFLFYSG HVAGSMIASL DMKRMQRFRL AMVFDILNVL
QSIRLLGTRG HYTIDIAVGV GAGILFDSLA GKYEEMSKRH LRNTRCSLIS KDSLVT