PDF2_CAEEL
ID PDF2_CAEEL Reviewed; 89 AA.
AC G5EGC3;
DT 23-FEB-2022, integrated into UniProtKB/Swiss-Prot.
DT 14-DEC-2011, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Pigment dispersing factor homolog pdf-2 {ECO:0000305};
DE Flags: Precursor;
GN Name=pdf-2 {ECO:0000312|WormBase:F48B9.4};
GN Synonyms=nlp-37 {ECO:0000312|WormBase:F48B9.4},
GN pdf2 {ECO:0000312|EMBL:ABO42260.1};
GN ORFNames=F48B9.4 {ECO:0000312|WormBase:F48B9.4};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239 {ECO:0000312|Proteomes:UP000001940};
RN [1] {ECO:0000312|EMBL:ABO42260.1}
RP NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
RX PubMed=19686386; DOI=10.1111/j.1471-4159.2009.06323.x;
RA Janssen T., Husson S.J., Meelkop E., Temmerman L., Lindemans M.,
RA Verstraelen K., Rademakers S., Mertens I., Nitabach M., Jansen G.,
RA Schoofs L.;
RT "Discovery and characterization of a conserved pigment dispersing factor-
RT like neuropeptide pathway in Caenorhabditis elegans.";
RL J. Neurochem. 111:228-241(2009).
RN [2] {ECO:0000312|Proteomes:UP000001940}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2 {ECO:0000312|Proteomes:UP000001940};
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [3] {ECO:0000305}
RP FUNCTION.
RX PubMed=18390545; DOI=10.1074/jbc.m709060200;
RA Janssen T., Husson S.J., Lindemans M., Mertens I., Rademakers S.,
RA Donck K.V., Geysen J., Jansen G., Schoofs L.;
RT "Functional characterization of three G protein-coupled receptors for
RT pigment dispersing factors in Caenorhabditis elegans.";
RL J. Biol. Chem. 283:15241-15249(2008).
RN [4] {ECO:0000305}
RP FUNCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=22579613; DOI=10.1016/j.mce.2012.05.001;
RA Meelkop E., Temmerman L., Janssen T., Suetens N., Beets I., Van Rompay L.,
RA Shanmugam N., Husson S.J., Schoofs L.;
RT "PDF receptor signaling in Caenorhabditis elegans modulates locomotion and
RT egg-laying.";
RL Mol. Cell. Endocrinol. 361:232-240(2012).
RN [5] {ECO:0000305}
RP FUNCTION.
RX PubMed=26113231; DOI=10.1111/gbb.12231;
RA Herrero A., Romanowski A., Meelkop E., Caldart C.S., Schoofs L.,
RA Golombek D.A.;
RT "Pigment-dispersing factor signaling in the circadian system of
RT Caenorhabditis elegans.";
RL Genes Brain Behav. 14:493-501(2015).
CC -!- FUNCTION: Probable ligand of isoforms a and b of the calcitonin
CC receptor-like protein, pdfr-1, a G-protein coupled receptor
CC (PubMed:18390545). May not signal through isoform c of pdfr-1
CC (PubMed:18390545). Involved in locomotion; may play a role in circadian
CC rhythms of locomotor activity (PubMed:18390545, PubMed:22579613,
CC PubMed:26113231). Modulator of egg-laying (PubMed:22579613).
CC {ECO:0000269|PubMed:18390545, ECO:0000269|PubMed:22579613,
CC ECO:0000269|PubMed:26113231}.
CC -!- DEVELOPMENTAL STAGE: Expressed in the interneurons BDUL/R, AVG, AIML/R,
CC RIS, AVD and PVT, the chemosensory neuron pairs PHA and PHB, the motor
CC neurons RID and RIML/R, the sensory neurons AQR and PQR, and in the
CC PVPL/R interneurons (PubMed:19686386). Also expressed in rectal gland
CC cells rectD and rectVL/R, the intestino-rectal valve cells virL/R and
CC three posterior arcade cells in the head (PubMed:19686386).
CC {ECO:0000269|PubMed:19686386}.
CC -!- DISRUPTION PHENOTYPE: Delay in the timing of the reproductive peak of
CC egg-laying. {ECO:0000269|PubMed:22579613}.
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DR EMBL; EF141321; ABO42260.1; -; mRNA.
DR EMBL; BX284606; CCD68823.1; -; Genomic_DNA.
DR PIR; T16394; T16394.
DR RefSeq; NP_508397.2; NM_075996.2.
DR AlphaFoldDB; G5EGC3; -.
DR STRING; 6239.F48B9.4; -.
DR EPD; G5EGC3; -.
DR PaxDb; G5EGC3; -.
DR EnsemblMetazoa; F48B9.4.1; F48B9.4.1; WBGene00018590.
DR GeneID; 185966; -.
DR KEGG; cel:CELE_F48B9.4; -.
DR CTD; 185966; -.
DR WormBase; F48B9.4; CE30276; WBGene00018590; pdf-2.
DR eggNOG; ENOG502SXAU; Eukaryota.
DR HOGENOM; CLU_2471188_0_0_1; -.
DR InParanoid; G5EGC3; -.
DR OMA; PAYAPHV; -.
DR OrthoDB; 1597851at2759; -.
DR Proteomes; UP000001940; Chromosome X.
DR Bgee; WBGene00018590; Expressed in larva and 3 other tissues.
DR GO; GO:0007189; P:adenylate cyclase-activating G protein-coupled receptor signaling pathway; IMP:UniProtKB.
DR GO; GO:0040011; P:locomotion; IMP:UniProtKB.
DR GO; GO:0045475; P:locomotor rhythm; IMP:UniProtKB.
DR GO; GO:0007567; P:parturition; IMP:UniProtKB.
PE 2: Evidence at transcript level;
KW Reference proteome; Signal.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..89
FT /note="Pigment dispersing factor homolog pdf-2"
FT /evidence="ECO:0000255"
FT /id="PRO_5015092027"
SQ SEQUENCE 89 AA; 9917 MW; E6645470792F1A71 CRC64;
MSSRISVSLL LLAVVATMFF TANVVDATPR SQGNMMRYGN SLPAYAPHVL YRFYNSRQFA
PINKRNNAEV VNHILKNFGA LDRLGDVGK