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PDIA1_CHICK
ID   PDIA1_CHICK             Reviewed;         515 AA.
AC   P09102; Q90969;
DT   01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT   16-MAY-2003, sequence version 3.
DT   03-AUG-2022, entry version 160.
DE   RecName: Full=Protein disulfide-isomerase;
DE            Short=PDI;
DE            EC=5.3.4.1;
DE   AltName: Full=Cellular thyroid hormone-binding protein;
DE   AltName: Full=Prolyl 4-hydroxylase subunit beta;
DE   AltName: Full=Retina cognin;
DE            Short=R-cognin;
DE   Flags: Precursor;
GN   Name=P4HB; Synonyms=PDI, PDIA1;
OS   Gallus gallus (Chicken).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC   Phasianinae; Gallus.
OX   NCBI_TaxID=9031;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], AND SEQUENCE REVISION TO 315; 356; 488; 491-493
RP   AND 497.
RA   Hausman R.E.;
RL   Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 139-515.
RC   TISSUE=Retina;
RX   PubMed=7681992; DOI=10.1073/pnas.90.7.2950;
RA   Krishna Rao A.S., Hausman R.E.;
RT   "cDNA for R-cognin: homology with a multifunctional protein.";
RL   Proc. Natl. Acad. Sci. U.S.A. 90:2950-2954(1993).
RN   [3]
RP   NUCLEOTIDE SEQUENCE OF 1-129; 163-172; 209-218; 244-253; 286-295; 353-463
RP   AND 483-515.
RX   PubMed=2852147; DOI=10.1016/0378-1119(88)90062-5;
RA   Nakazawa M., Aida T., Everson W.V., Gonda M.A., Hughes S.H., Kao W.W.;
RT   "Structure of the gene encoding the beta-subunit of chicken prolyl 4-
RT   hydroxylase.";
RL   Gene 71:451-460(1988).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 26-515, AND PROTEIN SEQUENCE OF 23-31 AND
RP   95-109.
RX   PubMed=2851999; DOI=10.1042/bj2561005;
RA   Parkkonen T., Kivirikko K.Z., Pihlajaniemi T.;
RT   "Molecular cloning of a multifunctional chicken protein acting as the
RT   prolyl 4-hydroxylase beta-subunit, protein disulphide-isomerase and a
RT   cellular thyroid-hormone-binding protein. Comparison of cDNA-deduced amino
RT   acid sequences with those in other species.";
RL   Biochem. J. 256:1005-1011(1988).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 399-459.
RA   Bassuk J.A.;
RL   Submitted (FEB-1988) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: This multifunctional protein catalyzes the formation,
CC       breakage and rearrangement of disulfide bonds. At the cell surface,
CC       seems to act as a reductase that cleaves disulfide bonds of proteins
CC       attached to the cell. May therefore cause structural modifications of
CC       exofacial proteins. Inside the cell, seems to form/rearrange disulfide
CC       bonds of nascent proteins. At high concentrations, functions as a
CC       chaperone that inhibits aggregation of misfolded proteins. At low
CC       concentrations, facilitates aggregation (anti-chaperone activity). Also
CC       acts a structural subunit of various enzymes such as prolyl 4-
CC       hydroxylase (By similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Catalyzes the rearrangement of -S-S- bonds in proteins.;
CC         EC=5.3.4.1;
CC   -!- SUBUNIT: Heterodimer; heterodimerizes with the protein microsomal
CC       triglyceride transfer MTTP. Homodimer. Monomers and homotetramers may
CC       also occur. Also constitutes the structural subunit of prolyl 4-
CC       hydroxylase. Stabilizes this enzyme and retains it in the ER without
CC       contributing to the catalytic activity. Binds UBQLN1 (By similarity).
CC       {ECO:0000250, ECO:0000250|UniProtKB:P07237}.
CC   -!- SUBCELLULAR LOCATION: Endoplasmic reticulum
CC       {ECO:0000250|UniProtKB:P07237}. Endoplasmic reticulum lumen
CC       {ECO:0000250|UniProtKB:P07237}. Cell membrane {ECO:0000305}; Peripheral
CC       membrane protein {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the protein disulfide isomerase family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAA49054.2; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; L11147; AAA49054.2; ALT_INIT; mRNA.
DR   EMBL; X13110; CAA31502.1; -; mRNA.
DR   EMBL; X06768; CAB57801.1; -; Genomic_DNA.
DR   PIR; S02084; ISCHSS.
DR   AlphaFoldDB; P09102; -.
DR   SMR; P09102; -.
DR   STRING; 9031.ENSGALP00000011689; -.
DR   PaxDb; P09102; -.
DR   VEuPathDB; HostDB:geneid_374091; -.
DR   eggNOG; KOG0190; Eukaryota.
DR   InParanoid; P09102; -.
DR   OrthoDB; 462118at2759; -.
DR   PhylomeDB; P09102; -.
DR   SABIO-RK; P09102; -.
DR   Proteomes; UP000000539; Unplaced.
DR   GO; GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.
DR   GO; GO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell.
DR   GO; GO:0009897; C:external side of plasma membrane; IBA:GO_Central.
DR   GO; GO:0003756; F:protein disulfide isomerase activity; IBA:GO_Central.
DR   GO; GO:0006457; P:protein folding; IBA:GO_Central.
DR   GO; GO:0034976; P:response to endoplasmic reticulum stress; IBA:GO_Central.
DR   InterPro; IPR005788; Disulphide_isomerase.
DR   InterPro; IPR005792; Prot_disulphide_isomerase.
DR   InterPro; IPR036249; Thioredoxin-like_sf.
DR   InterPro; IPR017937; Thioredoxin_CS.
DR   InterPro; IPR013766; Thioredoxin_domain.
DR   Pfam; PF00085; Thioredoxin; 2.
DR   SUPFAM; SSF52833; SSF52833; 4.
DR   TIGRFAMs; TIGR01130; ER_PDI_fam; 1.
DR   TIGRFAMs; TIGR01126; pdi_dom; 2.
DR   PROSITE; PS00014; ER_TARGET; 1.
DR   PROSITE; PS00194; THIOREDOXIN_1; 2.
DR   PROSITE; PS51352; THIOREDOXIN_2; 2.
PE   1: Evidence at protein level;
KW   Cell membrane; Chaperone; Direct protein sequencing; Disulfide bond;
KW   Endoplasmic reticulum; Isomerase; Membrane; Redox-active center;
KW   Reference proteome; Repeat; Signal.
FT   SIGNAL          1..22
FT                   /evidence="ECO:0000269|PubMed:2851999"
FT   CHAIN           23..515
FT                   /note="Protein disulfide-isomerase"
FT                   /evidence="ECO:0000269|PubMed:2851999"
FT                   /id="PRO_0000034200"
FT   DOMAIN          23..139
FT                   /note="Thioredoxin 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT   DOMAIN          351..480
FT                   /note="Thioredoxin 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT   REGION          477..515
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           512..515
FT                   /note="Prevents secretion from ER"
FT   COMPBIAS        483..515
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   ACT_SITE        58
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        61
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        402
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        405
FT                   /note="Nucleophile"
FT                   /evidence="ECO:0000250"
FT   SITE            59
FT                   /note="Contributes to redox potential value"
FT                   /evidence="ECO:0000250"
FT   SITE            60
FT                   /note="Contributes to redox potential value"
FT                   /evidence="ECO:0000250"
FT   SITE            125
FT                   /note="Lowers pKa of C-terminal Cys of first active site"
FT                   /evidence="ECO:0000250"
FT   SITE            403
FT                   /note="Contributes to redox potential value"
FT                   /evidence="ECO:0000250"
FT   SITE            404
FT                   /note="Contributes to redox potential value"
FT                   /evidence="ECO:0000250"
FT   SITE            466
FT                   /note="Lowers pKa of C-terminal Cys of second active site"
FT                   /evidence="ECO:0000250"
FT   DISULFID        58..61
FT                   /note="Redox-active"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT   DISULFID        402..405
FT                   /note="Redox-active"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT   CONFLICT        23
FT                   /note="E -> Q (in Ref. 1 and 3)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        94..95
FT                   /note="EL -> DV (in Ref. 3)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        359
FT                   /note="H -> Q (in Ref. 3)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        447
FT                   /note="T -> M (in Ref. 5; CAB57801)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   515 AA;  57410 MW;  E7CC978A5109C2CE CRC64;
     MAVVRVRAIV ALLCLVAALG LAEPLEEEDG VLVLRAANFE QALAAHRHLL VEFYAPWCGH
     CKALAPEYAK AAAQLKAEGS EIRLAKVDAT EEAELAQQFG VRGYPTIKFF RNGDKAAPRE
     YTAGREADDI VSWLKKRTGP AATTLTDAAA AETLVDSSEV VVIGFFKDVT SDAAKEFLLA
     AESVDDIPFG ISSSADVFSK YQLSQDGVVL FKKFDEGRNN FEGDLTKDNL LNFIKSNQLP
     LVIEFTEQTA PKIFGGEIKT HILLFLPKSV SDYEGKLDNF KTAAGNFKGK ILFIFIDSDH
     SDNQRILEFF GLKKEECPAV RLITLEEEMT KYKPESDDLT ADKIKEFCNK FLEGKIKPHL
     MSQDLPEDWD KQPVKVLVGK NFEEVAFDEN KNVFVEFYAP WCGHCKQLAP IWDKLGETYR
     DHENIVIAKM DSTANEVEAV KIHSFPTLKF FPAGSGRNVI DYNGERTLEG FKKFLESGGQ
     DGAAADDDLE DLETDEETDL EEGDDDEQKI QKDEL
 
 
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