PDI_RICCO
ID PDI_RICCO Reviewed; 498 AA.
AC Q43116;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Protein disulfide-isomerase;
DE Short=PDI;
DE EC=5.3.4.1;
DE Flags: Precursor;
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Hale;
RX PubMed=8631332; DOI=10.1111/j.1432-1033.1996.00215.x;
RA Coughlan S.J., Hastings C., Winfrey R.J.;
RT "Molecular characterisation of plant endoplasmic reticulum. Identification
RT of protein disulfide-isomerase as the major reticuloplasmin.";
RL Eur. J. Biochem. 235:215-224(1996).
CC -!- FUNCTION: Participates in the folding of proteins containing disulfide
CC bonds, may be involved in glycosylation, prolyl hydroxylation and
CC triglyceride transfer. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Catalyzes the rearrangement of -S-S- bonds in proteins.;
CC EC=5.3.4.1;
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum lumen {ECO:0000255|PROSITE-
CC ProRule:PRU10138}.
CC -!- SIMILARITY: Belongs to the protein disulfide isomerase family.
CC {ECO:0000305}.
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DR EMBL; U41385; AAB05641.1; -; mRNA.
DR PIR; S62626; S62626.
DR RefSeq; NP_001310686.1; NM_001323757.1.
DR AlphaFoldDB; Q43116; -.
DR SMR; Q43116; -.
DR STRING; 3988.XP_002513744.1; -.
DR PRIDE; Q43116; -.
DR GeneID; 8281065; -.
DR KEGG; rcu:8281065; -.
DR eggNOG; KOG0190; Eukaryota.
DR GO; GO:0005788; C:endoplasmic reticulum lumen; IDA:UniProtKB.
DR GO; GO:0003756; F:protein disulfide isomerase activity; IEA:UniProtKB-EC.
DR InterPro; IPR005788; Disulphide_isomerase.
DR InterPro; IPR005792; Prot_disulphide_isomerase.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR017937; Thioredoxin_CS.
DR InterPro; IPR013766; Thioredoxin_domain.
DR Pfam; PF00085; Thioredoxin; 2.
DR SUPFAM; SSF52833; SSF52833; 4.
DR TIGRFAMs; TIGR01130; ER_PDI_fam; 1.
DR TIGRFAMs; TIGR01126; pdi_dom; 2.
DR PROSITE; PS00014; ER_TARGET; 1.
DR PROSITE; PS00194; THIOREDOXIN_1; 2.
DR PROSITE; PS51352; THIOREDOXIN_2; 2.
PE 2: Evidence at transcript level;
KW Disulfide bond; Endoplasmic reticulum; Glycoprotein; Isomerase;
KW Redox-active center; Repeat; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..498
FT /note="Protein disulfide-isomerase"
FT /id="PRO_0000034211"
FT DOMAIN 24..143
FT /note="Thioredoxin 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT DOMAIN 339..484
FT /note="Thioredoxin 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT MOTIF 495..498
FT /note="Prevents secretion from ER"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10138"
FT ACT_SITE 61
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 64
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 406
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 409
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT SITE 62
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250"
FT SITE 63
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250"
FT SITE 129
FT /note="Lowers pKa of C-terminal Cys of first active site"
FT /evidence="ECO:0000250"
FT SITE 407
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250"
FT SITE 408
FT /note="Contributes to redox potential value"
FT /evidence="ECO:0000250"
FT SITE 470
FT /note="Lowers pKa of C-terminal Cys of second active site"
FT /evidence="ECO:0000250"
FT CARBOHYD 41
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 61..64
FT /note="Redox-active"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
FT DISULFID 406..409
FT /note="Redox-active"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00691"
SQ SEQUENCE 498 AA; 55561 MW; D556492D78F955D5 CRC64;
MASFRGSIWY CIFVLSLIAV AISAAESEEE QSSVLTLDST NFTDTISKHD FIVVEFYAPW
CGHCKKLRPE YEKAASILKS HDIPVVLAKV DANEEANKEL ATQYDIKGFP TLKILRNGGK
SIQEYKGPRE ADGIAEYLKK QSGPASVEIK STEAANTFIG DKKIFIVGVF PKFSGEEYEN
YMSVADKLRS DYEFGHTLDA KHLPQGESSV TGPVVRLFKP FDELFVDFKD FNVDALEKFV
EESSMPVVTV FNSDPSNHPF VIKFFNSPDA KAMLFMNFNG EAADSIKSKY QEVAHQFKGE
GIILLLGDVE ASQGAFQYFG LKEDQVPLII IQTNDGQKYL KANLEPDHIA PWVKAYKEGK
VQAYRKSEPI PEVNNEPVKV VVADTLQDIV FNSGKNVLLE FYAPWCGHCK QLAPILDEVA
VSYKSDADIV IAKLDATAND IPSDTFDVRG YPTVYFRSAS GKVEQYDGDR TKDDIISFIE
KNRDKAAQQE SANGKDEL